[←][→] ath   AT5G58003 Gene
functional annotation
Function   C-terminal domain phosphatase-like 4  
GO BP
GO:0070940 [list] [network] dephosphorylation of RNA polymerase II C-terminal domain  (14 genes)  IBA  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008022 [list] [network] protein C-terminus binding  (6 genes)  IPI  
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (17 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001078764.1  NP_001332019.1  NP_001332020.1 
BLAST NP_001078764.1  NP_001332019.1  NP_001332020.1 
Orthologous [Ortholog page] LOC4338679 (osa)  LOC7489451 (ppo)  LOC11411655 (mtr)  LOC11432635 (mtr)  LOC25486891 (mtr)  LOC25486896 (mtr)  LOC25486899 (mtr)  LOC25494112 (mtr)  LOC100286085 (zma)  LOC100785033 (gma)  LOC100800381 (gma)  LOC100852833 (vvi)  LOC100854176 (vvi)  LOC101264737 (sly)  LOC103845238 (bra)  LOC103856720 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001078764.1)
nucl 4,  cyto 4,  chlo 1,  extr 1,  cysk 1  (predict for NP_001332019.1)
nucl 5,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001332020.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001078764.1)
other 7  (predict for NP_001332019.1)
other 8  (predict for NP_001332020.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with CPL4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT1G17930 Aminotransferase-like, plant mobile domain family protein [detail] 838372
6.8 ADA2A ADA2 2A [detail] 819965
6.4 HUB2 histone mono-ubiquitination 2 [detail] 841968
6.0 APC7 tetratricopeptide repeat (TPR)-containing protein [detail] 818495
6.0 AT4G20340 Transcription factor TFIIE, alpha subunit [detail] 827782
6.0 AT5G20170 RNA polymerase II transcription mediator [detail] 832140
5.8 AHBP-1B bZIP transcription factor family protein [detail] 830586
4.1 AT3G11890 Sterile alpha motif (SAM) domain-containing protein [detail] 820362
Coexpressed
gene list		 [Coexpressed gene list for CPL4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247894_at
247894_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247894_at
247894_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247894_at
247894_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 5008312      
Refseq ID (protein) NP_001078764.1 
NP_001332019.1 
NP_001332020.1 


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