[←][→] sly   543587 Gene
functional annotation
Function   polygalacturonase  
GO BP
GO CC
GO MF
KEGG sly00040 [list] [network] Pentose and glucuronate interconversions (137 genes)
Protein NP_001234200.2  XP_019070574.1  XP_025888060.1  XP_025888061.1 
BLAST NP_001234200.2  XP_019070574.1  XP_025888060.1  XP_025888061.1 
Orthologous [Ortholog page] PGN (gma)  AT4G35670 (ath)  AT5G27530 (ath)  AT5G44830 (ath)  AT5G44840 (ath)  LOC7462983 (ppo)  LOC7495774 (ppo)  LOC11431564 (mtr)  LOC11436307 (mtr)  LOC11441952 (mtr)  LOC11444164 (mtr)  LOC11445713 (mtr)  LOC25480506 (mtr)  LOC25489045 (mtr)  LOC25495857 (mtr)  LOC25500203 (mtr)  LOC25500204 (mtr)  LOC100255950 (vvi)  LOC100257567 (vvi)  LOC100259292 (vvi)  LOC100262829 (vvi)  LOC100787282 (gma)  LOC100787465 (gma)  LOC100801372 (gma)  LOC100805782 (gma)  LOC100818729 (gma)  LOC100820332 (gma)  LOC101256371 (sly)  LOC103827823 (bra)  LOC103827827 (bra)  LOC103862427 (bra) 
Subcellular
localization
wolf
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for NP_001234200.2)
nucl 4,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  mito 1,  extr 1,  cysk 1,  cyto_pero 1  (predict for XP_019070574.1)
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for XP_025888060.1)
nucl 5,  E.R. 1,  E.R._plas 1,  plas 1,  cyto 1,  extr 1,  cysk 1  (predict for XP_025888061.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001234200.2)
scret 9  (predict for XP_019070574.1)
scret 9  (predict for XP_025888060.1)
scret 9  (predict for XP_025888061.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PGcat on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.0 LOC101260660 GATA transcription factor 26-like [detail] 101260660
4.1 LOC101249023 probable leucine-rich repeat receptor-like protein kinase At5g49770 [detail] 101249023
3.9 LOC101253401 BTB/POZ domain-containing protein NPY1 [detail] 101253401
3.7 LOC101262550 protein SHOOT GRAVITROPISM 5 [detail] 101262550
3.4 PIN5 auxin efflux carrier component 5 [detail] 100527969
Coexpressed
gene list		 [Coexpressed gene list for PGcat]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 543587      
Refseq ID (protein) NP_001234200.2 
XP_019070574.1 
XP_025888060.1 
XP_025888061.1 


The preparation time of this page was 0.2 [sec].