[←][→] sly   544104 Gene
functional annotation
Function   lycopene beta-cyclase  
GO BP
GO CC
GO MF
KEGG sly00906 [list] [network] Carotenoid biosynthesis (37 genes)
Protein NP_001234226.1  NP_001303688.1 
BLAST NP_001234226.1  NP_001303688.1 
Orthologous [Ortholog page] LYC (ath)  LOC4328572 (osa)  LOC7496096 (ppo)  LOC11419142 (mtr)  LOC100252133 (vvi)  LOC100383002 (zma)  LOC100783830 (gma)  LOC100810895 (gma)  LOC101267662 (sly)  LOC103870482 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 1,  plas 1,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001234226.1)
chlo 4,  nucl 1,  plas 1,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001303688.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001234226.1)
other 5  (predict for NP_001303688.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly01200 Carbon metabolism 3
sly00260 Glycine, serine and threonine metabolism 2
sly00710 Carbon fixation in photosynthetic organisms 2
sly00906 Carotenoid biosynthesis 2
Genes directly connected with LCY1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 LOC101258970 probable anion transporter 6, chloroplastic [detail] 101258970
5.7 PTC52 protochlorophyllide-dependent translocon component 52, chloroplastic [detail] 101255583
5.5 LOC101265236 glutamate--glyoxylate aminotransferase 2 [detail] 101265236
4.8 LOC101247753 phytochrome A-associated F-box protein [detail] 101247753
4.6 LOC101267662 lycopene beta cyclase, chloroplastic [detail] 101267662
Coexpressed
gene list		 [Coexpressed gene list for LCY1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 544104      
Refseq ID (protein) NP_001234226.1 
NP_001303688.1 


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