[][] ppo   POPTR_005G241300v3 Gene
functional annotation
Function   DEAD-box ATP-dependent RNA helicase 28
GO BP
GO CC
GO MF
KEGG
Protein XP_002306942.1  XP_024457364.1 
BLAST XP_002306942.1  XP_024457364.1 
Orthologous [Ortholog page] AT4G16630 (ath)LOC4352218 (osa)LOC11430849 (mtr)LOC25486470 (mtr)LOC100776684 (gma)LOC100782727 (gma)LOC100791233 (gma)LOC101266117 (sly)LOC103847697 (bra)LOC103869833 (bra)LOC123104921 (tae)LOC123113210 (tae)LOC123122731 (tae)LOC123452121 (hvu)
Subcellular
localization
wolf
nucl 9,  chlo 1,  golg 1  (predict for XP_002306942.1)
nucl 9,  chlo 1,  golg 1  (predict for XP_024457364.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002306942.1)
other 8  (predict for XP_024457364.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
Genes directly connected with LOC7485601 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.1 LOC7454698 nucleolar protein 56 [detail] 7454698
12.8 LOC7480138 DEAD-box ATP-dependent RNA helicase 16 [detail] 7480138
12.6 LOC7485119 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase [detail] 7485119
11.9 LOC7492103 nucleolar complex protein 3 homolog [detail] 7492103
11.8 LOC7473195 protein SDA1 homolog [detail] 7473195
11.4 LOC7455764 nucleolar complex protein 2 homolog [detail] 7455764
11.3 LOC7456107 DEAD-box ATP-dependent RNA helicase 5 [detail] 7456107
10.5 LOC7479617 DEAD-box ATP-dependent RNA helicase 53, mitochondrial [detail] 7479617
10.5 LOC7488047 rRNA biogenesis protein RRP5 [detail] 7488047
10.1 LOC7480131 ATPase family AAA domain-containing protein 3 [detail] 7480131
10.1 LOC18104578 something about silencing protein 10 [detail] 18104578
9.7 LOC7485118 DNA-directed RNA polymerases I and III subunit RPAC1 [detail] 7485118
9.2 LOC7493587 tetratricopeptide repeat protein 27 homolog [detail] 7493587
8.9 LOC7496504 WD repeat-containing protein 43 [detail] 7496504
8.9 LOC18106821 ribosome biogenesis protein BMS1 homolog [detail] 18106821
8.7 LOC7495019 p21-activated protein kinase-interacting protein 1-like [detail] 7495019
8.2 LOC7473613 RRP12-like protein [detail] 7473613
8.2 LOC7490485 suppressor protein SRP40 [detail] 7490485
8.1 LOC7476763 peptidyl-prolyl cis-trans isomerase FKBP53 [detail] 7476763
8.1 LOC7493908 transducin beta-like protein 3 [detail] 7493908
7.9 LOC7471608 pumilio homolog 23 [detail] 7471608
7.8 LOC7479654 calmodulin-interacting protein 111 [detail] 7479654
7.8 LOC7459936 mitochondrial proton/calcium exchanger protein [detail] 7459936
7.7 LOC7455749 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic [detail] 7455749
7.6 LOC7464006 RNA-binding protein 28 [detail] 7464006
7.6 LOC7478774 DNA polymerase V [detail] 7478774
7.5 LOC7466300 50S ribosomal protein L1 [detail] 7466300
7.4 LOC7486858 uncharacterized LOC7486858 [detail] 7486858
7.4 LOC7478057 probable DEAD-box ATP-dependent RNA helicase 48 [detail] 7478057
7.2 LOC18094001 elongation factor G-1, mitochondrial [detail] 18094001
6.9 LOC7460680 DEAD-box ATP-dependent RNA helicase 36 [detail] 7460680
6.9 LOC7475968 uncharacterized LOC7475968 [detail] 7475968
6.7 LOC7498215 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [detail] 7498215
6.6 LOC7477834 methyltransferase-like protein 17, mitochondrial [detail] 7477834
6.3 LOC7473293 uncharacterized LOC7473293 [detail] 7473293
6.1 LOC7455653 110 kDa U5 small nuclear ribonucleoprotein component CLO [detail] 7455653
5.9 LOC7469039 coilin [detail] 7469039
5.7 LOC7458285 uncharacterized LOC7458285 [detail] 7458285
5.3 LOC7473118 protein root UVB sensitive 4 [detail] 7473118
4.6 LOC112326025 mitochondrial inner membrane protein OXA1-like [detail] 112326025
3.6 LOC7489047 anaphase-promoting complex subunit 6 [detail] 7489047
Coexpressed
gene list
[Coexpressed gene list for LOC7485601]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7485601    
Refseq ID (protein) XP_002306942.1 
XP_024457364.1 


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