[←][→] sly   778324 Gene
functional annotation
Function   phytochromobilin synthase  
GO BP
GO CC
GO MF
KEGG sly00860 [list] [network] Porphyrin and chlorophyll metabolism (50 genes)
Protein NP_001234133.2  XP_010313054.1  XP_019067364.1  XP_025884712.1  XP_025884713.1  XP_025884715.1 
BLAST NP_001234133.2  XP_010313054.1  XP_019067364.1  XP_025884712.1  XP_025884713.1  XP_025884715.1 
Orthologous [Ortholog page] LOC542164 (zma)  HY2 (ath)  LOC4325761 (osa)  LOC11434871 (mtr)  LOC100267105 (vvi)  LOC100791053 (gma)  LOC103859309 (bra)  LOC103870559 (bra) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001234133.2)
cyto 4,  nucl 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_010313054.1)
chlo 6,  chlo_mito 4,  nucl 1,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for XP_019067364.1)
chlo 4,  chlo_mito 2,  plas 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  golg 1,  nucl_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_025884712.1)
nucl 5,  mito 4,  chlo 1  (predict for XP_025884713.1)
nucl 5,  mito 4,  chlo 1  (predict for XP_025884715.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001234133.2)
other 4,  mito 4  (predict for XP_010313054.1)
chlo 7  (predict for XP_019067364.1)
chlo 7  (predict for XP_025884712.1)
scret 6,  mito 3  (predict for XP_025884713.1)
scret 6,  mito 3  (predict for XP_025884715.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03015 mRNA surveillance pathway 2
Genes directly connected with AUREA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 LOC101254708 uncharacterized LOC101254708 [detail] 101254708
4.6 LOC101268418 pre-mRNA cleavage factor Im 25 kDa subunit 2 [detail] 101268418
4.4 LOC101244405 E2F-associated phosphoprotein [detail] 101244405
Coexpressed
gene list		 [Coexpressed gene list for AUREA]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 778324      
Refseq ID (protein) NP_001234133.2 
XP_010313054.1 
XP_019067364.1 
XP_025884712.1 
XP_025884713.1 
XP_025884715.1 


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