[←][→] ath   AT2G01640 Gene
functional annotation
Function   ribosome biogenesis protein  
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (9 genes)  IEA  
GO:0030686 [list] [network] 90S preribosome  (20 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IEA  
GO MF
KEGG
Protein NP_001189496.1  NP_565270.1 
BLAST NP_001189496.1  NP_565270.1 
Orthologous [Ortholog page] LOC4351878 (osa)  LOC7490059 (ppo)  LOC25485424 (mtr)  LOC100243540 (vvi)  LOC100278920 (zma)  LOC100527125 (gma)  LOC100782573 (gma)  LOC100802777 (gma)  LOC101245739 (sly)  LOC103628913 (zma)  LOC103634341 (zma)  LOC103634353 (zma)  LOC103648937 (zma)  LOC103854050 (bra)  LOC109945970 (zma) 
Subcellular
localization
wolf
nucl 8,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for NP_001189496.1)
nucl 8,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for NP_565270.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189496.1)
other 9  (predict for NP_565270.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT2G01640 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT3G52040 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [detail] 824367
7.4 AT1G75670 DNA-directed RNA polymerase [detail] 843901
7.4 AT2G45860 hypothetical protein [detail] 819194
7.3 AT2G31725 FAM136A-like protein (DUF842) [detail] 817729
6.9 AT2G40780 Nucleic acid-binding, OB-fold-like protein [detail] 818675
3.8 AT5G17210 transmembrane protein, putative (DUF1218) [detail] 831585
Coexpressed
gene list		 [Coexpressed gene list for AT2G01640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265874_at
265874_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265874_at
265874_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265874_at
265874_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814693      
Refseq ID (protein) NP_001189496.1 
NP_565270.1 


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