ATTED-II : GeneID search result

[←][→] ath AT2G02980 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0031425 [list] [network] chloroplast RNA processing	(22 genes)	IMP
GO:0006397 [list] [network] mRNA processing	(376 genes)	IEA
GO:0009451 [list] [network] RNA modification	(403 genes)	IBA

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

IDA ISM

GO MF

GO:0008270 [list] [network] zinc ion binding

(554 genes)

IEA

KEGG

Protein

NP_178398.1

BLAST

NP_178398.1

Orthologous

[Ortholog page] LOC4334412 (osa) LOC7481585 (ppo) LOC11417569 (mtr) LOC100191499 (zma) LOC100261911 (vvi) LOC100817794 (gma) LOC101261622 (sly) LOC103853967 (bra)

Subcellular
localization
wolf

nucl 4, chlo 2, cyto 2, nucl_plas 2

(predict for NP_178398.1)

Subcellular
localization
TargetP

chlo 8

(predict for NP_178398.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with OTP85 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.4	AT4G13650	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	826999
7.2	MEF20	mitochondrial editing factor 20	[detail]	821430
7.2	AT4G30825	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	829206
6.3	AT4G01030	pentatricopeptide (PPR) repeat-containing protein	[detail]	827926

Coexpressed
gene list

[Coexpressed gene list for OTP85]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266794_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266794_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266794_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	814827
Refseq ID (protein)	NP_178398.1

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