ATTED-II : GeneID search result

[←][→] ath AT2G03390 Gene

functional annotation

Function

uvrB/uvrC motif-containing protein

GO BP

GO CC

GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex	(8 genes)	IMP
GO:0009507 [list] [network] chloroplast	(5095 genes)	IBA IDA ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001189504.1 NP_001325258.1 NP_001325259.1 NP_001325260.1 NP_001325261.1 NP_001325262.1 NP_178438.2

BLAST

NP_001189504.1 NP_001325258.1 NP_001325259.1 NP_001325260.1 NP_001325261.1 NP_001325262.1 NP_178438.2

Orthologous

[Ortholog page] LOC4344777 (osa) LOC9269022 (osa) LOC11408922 (mtr) LOC100266199 (vvi) LOC100280211 (zma) LOC100783767 (gma) LOC100794023 (gma) LOC101251088 (sly) LOC103875431 (bra)

Subcellular
localization
wolf

nucl 4, mito 4, nucl_plas 3, cyto 1, plas 1	(predict for NP_001189504.1)
chlo 9	(predict for NP_001325258.1)
chlo 9	(predict for NP_001325259.1)
chlo 10	(predict for NP_001325260.1)
chlo 9	(predict for NP_001325261.1)
chlo 9	(predict for NP_001325262.1)
chlo 10	(predict for NP_178438.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001189504.1)
chlo 9	(predict for NP_001325258.1)
chlo 9	(predict for NP_001325259.1)
chlo 9	(predict for NP_001325260.1)
chlo 9	(predict for NP_001325261.1)
chlo 9	(predict for NP_001325262.1)
chlo 9	(predict for NP_178438.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G03390 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.3	AT5G25630	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	832639
6.9	AT5G03900	Iron-sulfur cluster biosynthesis family protein	[detail]	831927
6.5	STN7	Serine/Threonine kinase domain protein	[detail]	843215

Coexpressed
gene list

[Coexpressed gene list for AT2G03390]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265707_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265707_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265707_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	814868
Refseq ID (protein)	NP_001189504.1
	NP_001325258.1
	NP_001325259.1
	NP_001325260.1
	NP_001325261.1
	NP_001325262.1
	NP_178438.2

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