[←][→] ath   AT2G13540 Gene
functional annotation
Function   ARM repeat superfamily protein  
GO BP
GO:0006370 [list] [network] 7-methylguanosine mRNA capping  (5 genes)  IEA  
GO:0031053 [list] [network] primary miRNA processing  (12 genes)  IMP  
GO:0000394 [list] [network] RNA splicing, via endonucleolytic cleavage and ligation  (14 genes)  IMP  
GO:0048574 [list] [network] long-day photoperiodism, flowering  (16 genes)  IMP  
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (19 genes)  IBA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (38 genes)  IEA  
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO:1905392 [list] [network] plant organ morphogenesis  (393 genes)  NAS  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO CC
GO:0005846 [list] [network] nuclear cap binding complex  (3 genes)  IBA  
GO:0005845 [list] [network] mRNA cap binding complex  (4 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0000339 [list] [network] RNA cap binding  (9 genes)  IBA IDA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_565356.1 
BLAST NP_565356.1 
Orthologous [Ortholog page] LOC4332822 (osa)  LOC11429115 (mtr)  LOC100265341 (vvi)  LOC100384700 (zma)  LOC100791079 (gma)  LOC100811738 (gma)  LOC101249122 (sly)  LOC103860374 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_565356.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_565356.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 2
ath03013 RNA transport 2
Genes directly connected with ABH1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 MEE5 Ribosomal protein S5/Elongation factor G/III/V family protein [detail] 837131
7.4 ABO1 IKI3 family protein [detail] 831213
7.2 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein [detail] 816247
7.1 CYP71 cyclophilin71 [detail] 823585
7.0 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835958
6.7 AT5G53620 RNA polymerase II degradation factor [detail] 835444
6.6 THO1 nuclear matrix protein-like protein [detail] 830846
5.8 EMF2 VEFS-Box of polycomb protein [detail] 835198
4.8 AT5G35400 Pseudouridine synthase family protein [detail] 833501
4.5 AT5G37130 Protein prenylyltransferase superfamily protein [detail] 833685
Coexpressed
gene list		 [Coexpressed gene list for ABH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263727_at
263727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263727_at
263727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263727_at
263727_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 815840      
Refseq ID (protein) NP_565356.1 


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