| functional annotation |
| Function |
SNF2 domain-containing protein / helicase domain-containing protein |
|
| GO BP |
|
GO:0035563 [list] [network] positive regulation of chromatin binding
|
(1 genes)
|
IMP
|
 |
|
GO:0070829 [list] [network] heterochromatin maintenance
|
(1 genes)
|
IMP
|
|
|
GO:0071360 [list] [network] cellular response to exogenous dsRNA
|
(1 genes)
|
IMP
|
|
|
GO:1900111 [list] [network] positive regulation of histone H3-K9 dimethylation
|
(3 genes)
|
IMP
|
|
|
GO:1900370 [list] [network] positive regulation of RNA interference
|
(6 genes)
|
IMP
|
|
|
GO:0060964 [list] [network] regulation of gene silencing by miRNA
|
(9 genes)
|
IMP
|
|
|
GO:0010424 [list] [network] DNA methylation on cytosine within a CG sequence
|
(10 genes)
|
IMP
|
|
|
GO:1900368 [list] [network] regulation of RNA interference
|
(12 genes)
|
IMP
|
|
|
GO:0032776 [list] [network] DNA methylation on cytosine
|
(13 genes)
|
IMP
|
|
|
GO:0080188 [list] [network] RNA-directed DNA methylation
|
(20 genes)
|
IMP
|
|
|
GO:0060966 [list] [network] regulation of gene silencing by RNA
|
(22 genes)
|
IMP
|
|
|
GO:0030422 [list] [network] production of siRNA involved in RNA interference
|
(34 genes)
|
IGI
|
|
|
GO:0006306 [list] [network] DNA methylation
|
(50 genes)
|
IMP
|
|
|
GO:0060968 [list] [network] regulation of gene silencing
|
(60 genes)
|
IMP
|
|
|
GO:0050832 [list] [network] defense response to fungus
|
(517 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0004386 [list] [network] helicase activity
|
(157 genes)
|
IEA
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
ath03440 [list] [network] Homologous recombination (67 genes) |
 |
| Protein |
NP_001324537.1
NP_179232.1
|
| BLAST |
NP_001324537.1
NP_179232.1
|
| Orthologous |
[Ortholog page]
LOC4340671 (osa)
LOC4343066 (osa)
LOC9267584 (osa)
LOC9272476 (osa)
LOC25488181 (mtr)
LOC25501071 (mtr)
LOC100248561 (vvi)
LOC100260281 (vvi)
LOC100277391 (zma)
LOC100780454 (gma)
LOC100795356 (gma)
LOC101266874 (sly)
LOC103641317 (zma)
LOC103860454 (bra)
LOC107277180 (osa)
|
Subcellular
localization
wolf |
|
nucl 4,
cyto 4,
chlo 1,
E.R. 1,
cysk 1
|
(predict for NP_001324537.1)
|
|
cyto 4,
chlo 2,
cyto_pero 2,
cyto_E.R. 2
|
(predict for NP_179232.1)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001324537.1)
|
|
other 8
|
(predict for NP_179232.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with DRD1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 9.0 |
AT1G72410 |
COP1-interacting protein-like protein |
[detail] |
843573 |
| 6.4 |
AT2G35920 |
RNA helicase family protein |
[detail] |
818165 |
| 6.1 |
DRM2 |
domains rearranged methyltransferase 2 |
[detail] |
831315 |
| 6.0 |
TRN1 |
tornado 1 |
[detail] |
835648 |
| 5.8 |
AT5G12440 |
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein |
[detail] |
831119 |
| 5.5 |
AT1G79220 |
Mitochondrial transcription termination factor family protein |
[detail] |
844263 |
| 4.8 |
AT1G48280 |
hydroxyproline-rich glycoprotein family protein |
[detail] |
841248 |
| 4.8 |
AT4G14840 |
spindle assembly abnormal protein |
[detail] |
827141 |
| 4.5 |
SUVH5 |
SU(VAR)3-9 homolog 5 |
[detail] |
818083 |
|
Coexpressed
gene list |
[Coexpressed gene list for DRD1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
263600_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
263600_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
263600_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT2G16390 Gene
