ATTED-II : GeneID search result

[←][→] ath AT2G17140 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

ISM

GO MF

KEGG

Protein

NP_001325411.1 NP_179305.2

BLAST

NP_001325411.1 NP_179305.2

Orthologous

[Ortholog page] LOC4328201 (osa) LOC11423830 (mtr) LOC100262264 (vvi) LOC100803535 (gma) LOC101254742 (sly) LOC103654960 (zma) LOC103845989 (bra)

Subcellular
localization
wolf

chlo 6, chlo_mito 4, mito 1, cyto_mito 1	(predict for NP_001325411.1)
chlo 6, chlo_mito 4, mito 1, cyto_mito 1	(predict for NP_179305.2)

Subcellular
localization
TargetP

mito 3, other 3	(predict for NP_001325411.1)
mito 3, other 3	(predict for NP_179305.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G17140 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.4	AT3G49142	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	10723034
8.9	AT3G15130	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	820744
8.8	AT3G18020	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	821326
7.5	AT3G05340	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	819698
5.1	AT3G44690	hypothetical protein	[detail]	823595
4.9	AT3G61520	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	825325

Coexpressed
gene list

[Coexpressed gene list for AT2G17140]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263580_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263580_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263580_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816219
Refseq ID (protein)	NP_001325411.1
Refseq ID (protein)	NP_179305.2

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