[←][→] ath   AT2G20580 Gene
functional annotation
Function   26S proteasome regulatory subunit S2 1A  
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (58 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0051726 [list] [network] regulation of cell cycle  (216 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (322 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0030163 [list] [network] protein catabolic process  (603 genes)  TAS  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (5 genes)  IBA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (15 genes)  IBA IDA  
GO:0000502 [list] [network] proteasome complex  (80 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM TAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IDA  
GO:0004175 [list] [network] endopeptidase activity  (308 genes)  IBA  
GO:0030234 [list] [network] enzyme regulator activity  (427 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_565477.1 
BLAST NP_565477.1 
Orthologous [Ortholog page] RPN1B (ath)  LOC4328287 (osa)  LOC4341960 (osa)  LOC4346741 (osa)  LOC7469564 (ppo)  LOC11445486 (mtr)  LOC100255701 (vvi)  LOC100384330 (zma)  LOC100777078 (gma)  LOC100799779 (gma)  LOC101252199 (sly)  LOC103654920 (zma)  LOC103828246 (bra)  LOC103854417 (bra)  LOC103861833 (bra) 
Subcellular
localization
wolf
plas 7,  nucl 1,  cyto 1,  cysk 1  (predict for NP_565477.1)
Subcellular
localization
TargetP
other 9  (predict for NP_565477.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 12
ath04141 Protein processing in endoplasmic reticulum 4
Genes directly connected with RPN1A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.9 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit [detail] 817833
10.5 CDC48 cell division cycle 48 [detail] 820142
10.4 EMB2719 PAM domain (PCI/PINT associated module) protein [detail] 838609
10.2 RPN1B 26S proteasome regulatory subunit S2 1B [detail] 828964
9.9 AT2G17190 ubiquitin family protein [detail] 816224
8.5 SAY1 Ubiquitin-like superfamily protein [detail] 826779
8.4 AT5G15400 U-box domain-containing protein [detail] 831392
7.9 ftsh3 FTSH protease 3 [detail] 817456
7.0 APM1 aminopeptidase M1 [detail] 829446
Coexpressed
gene list		 [Coexpressed gene list for RPN1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263716_at
263716_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263716_at
263716_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263716_at
263716_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816580      
Refseq ID (protein) NP_565477.1 


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