[←][→] ath   AT2G20860 Gene
functional annotation
Function   lipoic acid synthase 1  
GO BP
GO:0009107 [list] [network] lipoate biosynthetic process  (2 genes)  IBA IGI TAS  
GO:0006546 [list] [network] glycine catabolic process  (8 genes)  TAS  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0016992 [list] [network] lipoate synthase activity  (2 genes)  IBA IGI  
KEGG ath00785 [list] [network] Lipoic acid metabolism (5 genes)
Protein NP_001318257.1  NP_001323612.1  NP_179682.1 
BLAST NP_001318257.1  NP_001323612.1  NP_179682.1 
Orthologous [Ortholog page] LOC4336023 (osa)  LOC7486347 (ppo)  LOC25487617 (mtr)  LOC100251365 (vvi)  LOC100279807 (zma)  LOC100775835 (gma)  LOC100789911 (gma)  LOC101258875 (sly)  LOC103842579 (bra) 
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1  (predict for NP_001318257.1)
chlo 6,  mito 2,  nucl 1  (predict for NP_001323612.1)
chlo 6,  mito 2,  nucl 1  (predict for NP_179682.1)
Subcellular
localization
TargetP
mito 9,  chlo 3  (predict for NP_001318257.1)
mito 9,  chlo 3  (predict for NP_001323612.1)
mito 9,  chlo 3  (predict for NP_179682.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath01230 Biosynthesis of amino acids 6
ath00010 Glycolysis / Gluconeogenesis 4
ath00710 Carbon fixation in photosynthetic organisms 3
ath00920 Sulfur metabolism 2
Genes directly connected with LIP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 TIM triosephosphate isomerase [detail] 816652
7.3 AT4G38225 glycerol kinase [detail] 829979
6.6 AT1G33330 Class I peptide chain release factor [detail] 840227
6.3 SOX sulfite oxidase [detail] 820118
Coexpressed
gene list		 [Coexpressed gene list for LIP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265392_at
265392_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265392_at
265392_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265392_at
265392_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816619      
Refseq ID (protein) NP_001318257.1 
NP_001323612.1 
NP_179682.1 


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