| functional annotation |
| Function |
Coatomer, alpha subunit |
|
| GO BP |
|
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
|
(29 genes)
|
IBA
|
 |
|
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport
|
(35 genes)
|
IBA
|
|
|
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport
|
(84 genes)
|
IBA
|
|
|
GO:0006886 [list] [network] intracellular protein transport
|
(516 genes)
|
IBA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0005198 [list] [network] structural molecule activity
|
(369 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_179734.1
|
| BLAST |
NP_179734.1
|
| Orthologous |
[Ortholog page]
AT1G62020 (ath)
LOC4333885 (osa)
LOC4333886 (osa)
LOC4346440 (osa)
LOC7462537 (ppo)
LOC7484772 (ppo)
LOC11439634 (mtr)
LOC25484848 (mtr)
LOC100192909 (zma)
LOC100253944 (vvi)
LOC100384351 (zma)
LOC100502115 (zma)
LOC100778853 (gma)
LOC100781504 (gma)
LOC100784701 (gma)
LOC100802600 (gma)
LOC100805072 (gma)
LOC101251283 (sly)
LOC101264027 (sly)
LOC103828029 (bra)
LOC103828031 (bra)
LOC103835112 (bra)
|
Subcellular
localization
wolf |
|
chlo 3,
nucl 3,
plas 1,
chlo_mito 1,
cyto 1,
vacu 1,
cysk 1,
golg 1,
E.R._plas 1,
mito_plas 1
|
(predict for NP_179734.1)
|
|
Subcellular
localization
TargetP |
|
mito 8,
other 3
|
(predict for NP_179734.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04144 |
Endocytosis |
2 |
 |
Genes directly connected with AT2G21390 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 16.1 |
AT1G62020 |
Coatomer, alpha subunit |
[detail] |
842497 |
| 15.6 |
AT3G11130 |
Clathrin, heavy chain |
[detail] |
820284 |
| 13.6 |
AT4G34450 |
coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP |
[detail] |
829596 |
| 13.5 |
AT3G08530 |
Clathrin, heavy chain |
[detail] |
820001 |
| 12.1 |
AT4G31480 |
Coatomer, beta subunit |
[detail] |
829275 |
| 12.0 |
AT4G31490 |
Coatomer, beta subunit |
[detail] |
829276 |
| 10.0 |
TRS120 |
TRS120 |
[detail] |
830971 |
| 9.8 |
AT1G14670 |
Endomembrane protein 70 protein family |
[detail] |
838029 |
| 9.6 |
AT4G24840 |
oligomeric golgi complex subunit-like protein |
[detail] |
828587 |
| 8.9 |
Tudor1 |
TUDOR-SN protein 1 |
[detail] |
830626 |
| 8.9 |
AT5G24710 |
Transducin/WD40 repeat-like superfamily protein |
[detail] |
832542 |
| 8.8 |
AT1G79990 |
coatomer subunit beta-2 |
[detail] |
844339 |
| 8.7 |
EYE |
conserved oligomeric Golgi complex component-related / COG complex component-like protein |
[detail] |
835217 |
| 8.5 |
CCC1 |
cation-chloride co-transporter 1 |
[detail] |
839924 |
| 8.4 |
AT5G65950 |
trafficking protein particle complex subunit-like protein |
[detail] |
836725 |
| 7.9 |
PK3 |
serine/threonine protein kinase 3 |
[detail] |
830712 |
| 7.8 |
HSP91 |
heat shock protein 91 |
[detail] |
844333 |
| 7.7 |
EXO84B |
exocyst complex component 84B |
[detail] |
835046 |
| 7.1 |
GMII |
golgi alpha-mannosidase II |
[detail] |
831347 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT2G21390]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
263743_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
263743_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
263743_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT2G21390 Gene
