ATTED-II : GeneID search result

[←][→] ath AT2G22370 Gene

functional annotation

Function

mediator of RNA polymerase II transcription subunit

GO BP

GO:2001253 [list] [network] regulation of histone H3-K36 trimethylation	(1 genes)	IMP
GO:0031554 [list] [network] regulation of DNA-templated transcription, termination	(2 genes)	IDA
GO:0006369 [list] [network] termination of RNA polymerase II transcription	(5 genes)	IBA
GO:0010219 [list] [network] regulation of vernalization response	(5 genes)	IMP
GO:0048833 [list] [network] specification of floral organ number	(5 genes)	IMP
GO:0048442 [list] [network] sepal development	(8 genes)	IGI
GO:2000142 [list] [network] regulation of DNA-templated transcription, initiation	(17 genes)	IDA
GO:0048441 [list] [network] petal development	(20 genes)	IGI
GO:2000031 [list] [network] regulation of salicylic acid mediated signaling pathway	(23 genes)	IMP
GO:1900150 [list] [network] regulation of defense response to fungus	(25 genes)	IMP
GO:0032784 [list] [network] regulation of DNA-templated transcription, elongation	(29 genes)	IDA
GO:0035196 [list] [network] production of miRNAs involved in gene silencing by miRNA	(29 genes)	IMP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase	(36 genes)	IMP
GO:2000028 [list] [network] regulation of photoperiodism, flowering	(63 genes)	IMP
GO:0048440 [list] [network] carpel development	(79 genes)	IGI
GO:0048443 [list] [network] stamen development	(101 genes)	IGI
GO:0009873 [list] [network] ethylene-activated signaling pathway	(191 genes)	IEA
GO:0009738 [list] [network] abscisic acid-activated signaling pathway	(194 genes)	IEA
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated	(253 genes)	IMP
GO:0009723 [list] [network] response to ethylene	(297 genes)	IMP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II	(334 genes)	IEA
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IMP
GO:0006952 [list] [network] defense response	(1420 genes)	IEA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IMP

GO CC

GO:0070847 [list] [network] core mediator complex	(8 genes)	IBA
GO:0016592 [list] [network] mediator complex	(43 genes)	IBA IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA ISM

GO MF

GO:0003712 [list] [network] transcription coregulator activity	(111 genes)	IBA IMP
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_565534.1

BLAST

NP_565534.1

Orthologous

[Ortholog page] LOC4328596 (osa) LOC7466799 (ppo) LOC11425921 (mtr) LOC25488262 (mtr) LOC100217154 (zma) LOC100250557 (vvi) LOC100500095 (gma) LOC100775237 (gma) LOC100803031 (gma) MED18 (sly) LOC103864344 (bra)

Subcellular
localization
wolf

cyto 8, chlo 1

(predict for NP_565534.1)

Subcellular
localization
TargetP

other 5

(predict for NP_565534.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

Genes directly connected with AT2G22370 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.3	AT3G52760	Integral membrane Yip1 family protein	[detail]	824442
5.9	UBC14	ubiquitin-conjugating enzyme 14	[detail]	824704
5.8	AT1G30890	Integral membrane HRF1 family protein	[detail]	839973

Coexpressed
gene list

[Coexpressed gene list for AT2G22370]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263999_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263999_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263999_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816769
Refseq ID (protein)	NP_565534.1

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