[←][→] ath   AT2G22780 Gene
functional annotation
Function   peroxisomal NAD-malate dehydrogenase 1  
GO BP
GO:0080093 [list] [network] regulation of photorespiration  (3 genes)  IMP  
GO:0031998 [list] [network] regulation of fatty acid beta-oxidation  (5 genes)  IGI IMP  
GO:0006097 [list] [network] glyoxylate cycle  (7 genes)  IEA  
GO:0006108 [list] [network] malate metabolic process  (17 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0030060 [list] [network] L-malate dehydrogenase activity  (7 genes)  IBA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)
ath00620 [list] [network] Pyruvate metabolism (86 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_179863.1 
BLAST NP_179863.1 
Orthologous [Ortholog page] LOC732641 (gma)  gMDH (sly)  PMDH2 (ath)  LOC4334274 (osa)  LOC4352871 (osa)  LOC7465546 (ppo)  LOC7469671 (ppo)  LOC11405683 (mtr)  LOC11420535 (mtr)  LOC100170735 (gma)  LOC100193491 (zma)  LOC100232924 (vvi)  LOC100260994 (vvi)  LOC100282134 (zma)  LOC100799793 (gma)  LOC101249428 (sly)  LOC103847223 (bra)  LOC103850366 (bra)  LOC103864390 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_pero 3,  pero 3  (predict for NP_179863.1)
Subcellular
localization
TargetP
other 7  (predict for NP_179863.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath04146 Peroxisome 6
ath00020 Citrate cycle (TCA cycle) 5
ath01210 2-Oxocarboxylic acid metabolism 5
ath01230 Biosynthesis of amino acids 5
Genes directly connected with PMDH1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 MFP2 multifunctional protein 2 [detail] 819870
7.3 ALDH10A9 aldehyde dehydrogenase 10A9 [detail] 823972
7.0 ICDH isocitrate dehydrogenase [detail] 841875
6.9 IBR1 indole-3-butyric acid response 1 [detail] 825905
6.8 ECH2 enoyl-CoA hydratase 2 [detail] 843947
5.3 AT1G03030 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839473
Coexpressed
gene list		 [Coexpressed gene list for PMDH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266457_at
266457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266457_at
266457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266457_at
266457_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816808      
Refseq ID (protein) NP_179863.1 


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