[←][→] ath   AT2G23940 Gene
functional annotation
Function   transmembrane protein (DUF788)  
GO BP
GO:0006624 [list] [network] vacuolar protein processing  (7 genes)  IBA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001324054.1  NP_001324055.1  NP_565558.1 
BLAST NP_001324054.1  NP_001324055.1  NP_565558.1 
Orthologous [Ortholog page] AT4G30500 (ath)  LOC4330253 (osa)  LOC7493366 (ppo)  LOC11443815 (mtr)  LOC100192887 (zma)  LOC100306037 (gma)  LOC100500677 (gma)  LOC100854316 (vvi)  LOC101255898 (sly)  LOC103852632 (bra)  LOC103861970 (bra) 
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  mito 1,  nucl 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001324054.1)
cyto 5,  cyto_nucl 4,  mito 1,  nucl 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001324055.1)
cyto 5,  cyto_nucl 4,  mito 1,  nucl 1,  chlo_mito 1,  mito_plas 1  (predict for NP_565558.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001324054.1)
other 7,  mito 4  (predict for NP_001324055.1)
other 7,  mito 4  (predict for NP_565558.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G23940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT5G58030 Transport protein particle (TRAPP) component [detail] 835915
7.7 AT4G12590 ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane) [detail] 826872
7.3 CYP5 cyclophilin 5 [detail] 817546
6.3 AT1G26940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 839584
6.2 LSM1A Small nuclear ribonucleoprotein family protein [detail] 838495
6.2 AT5G23550 Got1/Sft2-like vescicle transport protein family [detail] 832421
5.6 AT4G10280 RmlC-like cupins superfamily protein [detail] 826620
4.9 MAPR4 membrane-associated progesterone binding protein 4 [detail] 827155
4.5 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein [detail] 831550
Coexpressed
gene list		 [Coexpressed gene list for AT2G23940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266576_at
266576_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266576_at
266576_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266576_at
266576_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816926      
Refseq ID (protein) NP_001324054.1 
NP_001324055.1 
NP_565558.1 


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