[←][→] ath   AT2G25850 Gene
functional annotation
Function   poly(A) polymerase 2  
GO BP
GO:0006378 [list] [network] mRNA polyadenylation  (20 genes)  IBA  
GO:0043631 [list] [network] RNA polyadenylation  (21 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0004652 [list] [network] polynucleotide adenylyltransferase activity  (6 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001031417.1  NP_001189603.1  NP_001324469.1  NP_001324470.1  NP_001324471.1  NP_001324472.1  NP_001324473.1  NP_565611.1  NP_850071.1 
BLAST NP_001031417.1  NP_001189603.1  NP_001324469.1  NP_001324470.1  NP_001324471.1  NP_001324472.1  NP_001324473.1  NP_565611.1  NP_850071.1 
Orthologous [Ortholog page] nPAP (ath)  LOC4328790 (osa)  LOC7462286 (ppo)  LOC7463733 (ppo)  LOC9268632 (osa)  LOC25490147 (mtr)  LOC100263460 (vvi)  LOC100278989 (zma)  LOC100280371 (zma)  LOC100382126 (zma)  LOC100783237 (gma)  LOC100798218 (gma)  LOC100802620 (gma)  LOC100819294 (gma)  LOC101247241 (sly)  LOC101268462 (sly)  LOC103850374 (bra)  LOC103864694 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for NP_001031417.1)
nucl 8,  chlo 2  (predict for NP_001189603.1)
nucl 6,  plas 1,  vacu 1,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001324469.1)
nucl 7,  chlo 2  (predict for NP_001324470.1)
nucl 7,  chlo 2  (predict for NP_001324471.1)
nucl 7,  chlo 2  (predict for NP_001324472.1)
nucl 7,  chlo 2  (predict for NP_001324473.1)
nucl 8,  chlo 2  (predict for NP_565611.1)
nucl 8,  chlo 2  (predict for NP_850071.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031417.1)
other 8  (predict for NP_001189603.1)
other 8  (predict for NP_001324469.1)
other 8  (predict for NP_001324470.1)
other 8  (predict for NP_001324471.1)
other 8  (predict for NP_001324472.1)
other 8  (predict for NP_001324473.1)
other 8  (predict for NP_565611.1)
other 8  (predict for NP_850071.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath04626 Plant-pathogen interaction 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with PAPS2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 nPAP nuclear poly(a) polymerase [detail] 829421
8.3 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 818834
8.2 AT1G26580 ELM2 domain protein [detail] 839198
6.6 AT1G18160 Protein kinase superfamily protein [detail] 838395
5.9 FRS2 FAR1-related sequence 2 [detail] 817785
5.7 RPS4 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834561
5.1 RRS1 Disease resistance protein (TIR-NBS-LRR class) [detail] 834562
Coexpressed
gene list		 [Coexpressed gene list for PAPS2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266659_at
266659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266659_at
266659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266659_at
266659_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817127      
Refseq ID (protein) NP_001031417.1 
NP_001189603.1 
NP_001324469.1 
NP_001324470.1 
NP_001324471.1 
NP_001324472.1 
NP_001324473.1 
NP_565611.1 
NP_850071.1 


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