[←][→] ath   AT2G28230 Gene
functional annotation
Function   TATA-binding related factor (TRF) of subunit 20 of Mediator complex  
GO BP
GO:2000031 [list] [network] regulation of salicylic acid mediated signaling pathway  (23 genes)  IMP  
GO:1900150 [list] [network] regulation of defense response to fungus  (25 genes)  IMP  
GO:0035196 [list] [network] production of miRNAs involved in gene silencing by miRNA  (29 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IMP  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IBA  
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (36 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324170.1  NP_180390.2 
BLAST NP_001324170.1  NP_180390.2 
Orthologous [Ortholog page] AT4G09070 (ath)  LOC25486902 (mtr)  LOC25494183 (mtr)  LOC100247363 (vvi)  LOC100276988 (zma)  LOC100794645 (gma)  LOC100814806 (gma)  LOC101245597 (sly)  LOC101247079 (sly)  LOC101248747 (sly)  LOC101255794 (sly)  LOC101257614 (sly)  LOC101267070 (sly)  LOC103829718 (bra) 
Subcellular
localization
wolf
cyto 6,  cyto_nucl 6,  nucl 2  (predict for NP_001324170.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_180390.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001324170.1)
other 6  (predict for NP_180390.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03018 RNA degradation 3
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with AT2G28230 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 LSM2 Small nuclear ribonucleoprotein family protein [detail] 839526
6.0 AT2G38680 5'-nucleotidase / magnesium ion binding protein [detail] 818450
5.9 GOS12 golgi snare 12 [detail] 819128
5.4 EMB3006 embryo defective 3006 [detail] 827676
5.3 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein [detail] 835580
5.1 AT2G37195 acyl-CoA-binding domain protein [detail] 818296
Coexpressed
gene list		 [Coexpressed gene list for AT2G28230]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 817369      
Refseq ID (protein) NP_001324170.1 
NP_180390.2 


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