[←][→] ath   AT2G28450 Gene
functional annotation
Function   zinc finger (CCCH-type) family protein  
GO BP
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (51 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001189623.1  NP_180412.2 
BLAST NP_001189623.1  NP_180412.2 
Orthologous [Ortholog page] LOC7491136 (ppo)  LOC9271204 (osa)  LOC11405605 (mtr)  LOC100262197 (vvi)  LOC100777601 (gma)  LOC100816103 (gma)  LOC101256158 (sly)  LOC103641439 (zma)  LOC103646885 (zma)  LOC103829742 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_001189623.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_180412.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001189623.1)
other 7  (predict for NP_180412.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03013 RNA transport 2
Genes directly connected with AT2G28450 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT5G15810 tRNA (guanine(26)-N(2))-dimethyltransferase [detail] 831438
7.5 TOZ Transducin family protein / WD-40 repeat family protein [detail] 831538
7.5 STRS2 DEA(D/H)-box RNA helicase family protein [detail] 830763
6.6 CIP111 Cam interacting protein 111 [detail] 824836
5.2 AT5G08600 U3 ribonucleoprotein (Utp) family protein [detail] 830761
Coexpressed
gene list		 [Coexpressed gene list for AT2G28450]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265274_at
265274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265274_at
265274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265274_at
265274_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817393      
Refseq ID (protein) NP_001189623.1 
NP_180412.2 


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