[←][→] ath   AT2G29210 Gene
functional annotation
Function   splicing factor PWI domain-containing protein  
GO BP
GO:0008380 [list] [network] RNA splicing  (272 genes)  NAS  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001324350.1  NP_180484.2 
BLAST NP_001324350.1  NP_180484.2 
Orthologous [Ortholog page] LOC4332383 (osa)  LOC11427645 (mtr)  LOC100246732 (vvi)  LOC100304415 (zma)  LOC100790051 (gma)  LOC100810238 (gma)  LOC101263053 (sly)  LOC103868054 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001324350.1)
nucl 10  (predict for NP_180484.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001324350.1)
other 6  (predict for NP_180484.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT2G29210 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT1G28060 Pre-mRNA-splicing factor 3 [detail] 839699
8.8 PRP40C pre-mRNA-processing protein 40C [detail] 821521
8.6 GTE4 global transcription factor group E4 [detail] 837133
7.8 AT3G52660 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824432
6.1 SNX2a sorting nexin 2A [detail] 835957
Coexpressed
gene list		 [Coexpressed gene list for AT2G29210]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266283_at
266283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266283_at
266283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266283_at
266283_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817470      
Refseq ID (protein) NP_001324350.1 
NP_180484.2 


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