[←][→] ath   AT2G38185 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (124 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_565884.2  NP_973631.1  NP_973632.1  NP_973633.2 
BLAST NP_565884.2  NP_973631.1  NP_973632.1  NP_973633.2 
Orthologous [Ortholog page] APD3 (ath)  APD2 (ath)  APD4 (ath)  LOC7466072 (ppo)  LOC9269468 (osa)  LOC25490879 (mtr)  LOC25498753 (mtr)  LOC100247198 (vvi)  LOC100258653 (vvi)  LOC100777141 (gma)  LOC100791057 (gma)  LOC101252808 (sly)  LOC103855419 (bra)  LOC103857765 (bra)  LOC103867127 (bra)  LOC103867128 (bra)  LOC103867129 (bra)  LOC107280014 (osa) 
Subcellular
localization
wolf
plas 5,  E.R. 1,  chlo 1,  nucl 1,  extr 1,  vacu 1,  golg 1,  cyto_E.R. 1  (predict for NP_565884.2)
plas 5,  E.R. 1,  chlo 1,  nucl 1,  extr 1,  vacu 1,  golg 1,  cyto_E.R. 1  (predict for NP_973631.1)
vacu 4,  chlo 2,  cyto 1,  golg 1,  plas 1,  extr 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_973632.1)
plas 6,  chlo 1,  nucl 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for NP_973633.2)
Subcellular
localization
TargetP
other 8  (predict for NP_565884.2)
other 8  (predict for NP_973631.1)
scret 4,  mito 4  (predict for NP_973632.1)
other 8  (predict for NP_973633.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with APD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 PEX10 peroxin 10 [detail] 817175
5.3 RAD51D DNA repair RAD51-like protein [detail] 837289
5.1 AT4G20310 Peptidase M50 family protein [detail] 827778
4.5 AGL65 AGAMOUS-like 65 [detail] 838457
3.6 AT4G13400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 826971
Coexpressed
gene list		 [Coexpressed gene list for APD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267091_at
267091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267091_at
267091_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267091_at
267091_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818397      
Refseq ID (protein) NP_565884.2 
NP_973631.1 
NP_973632.1 
NP_973633.2 


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