[←][→] ath   AT2G39100 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (7 genes)  IBA  
GO:0000209 [list] [network] protein polyubiquitination  (71 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
KEGG
Protein NP_001323588.1  NP_850310.1 
BLAST NP_001323588.1  NP_850310.1 
Orthologous [Ortholog page] LOC100259613 (vvi)  LOC101268001 (sly)  LOC103865701 (bra) 
Subcellular
localization
wolf
nucl 7,  mito 2  (predict for NP_001323588.1)
nucl 5,  mito 3,  chlo 1,  cyto_mito 1  (predict for NP_850310.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001323588.1)
chlo 7  (predict for NP_850310.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT2G39100 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT3G11100 sequence-specific DNA binding transcription factor [detail] 820281
5.2 ASIL2 sequence-specific DNA binding transcription factor [detail] 820635
5.1 AT1G73380 hypothetical protein [detail] 843673
4.2 AT1G12790 DNA ligase-like protein [detail] 837835
Coexpressed
gene list		 [Coexpressed gene list for AT2G39100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266195_at
266195_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266195_at
266195_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266195_at
266195_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818496      
Refseq ID (protein) NP_001323588.1 
NP_850310.1 


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