[←][→] ath   AT2G40060 Gene
functional annotation
Function   Clathrin light chain protein  
GO BP
GO:0048268 [list] [network] clathrin coat assembly  (17 genes)  IBA  
GO:0072583 [list] [network] clathrin-dependent endocytosis  (35 genes)  IBA  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IEA  
GO CC
GO:0030130 [list] [network] clathrin coat of trans-Golgi network vesicle  (6 genes)  IEA  
GO:0030132 [list] [network] clathrin coat of coated pit  (6 genes)  IEA  
GO:0030125 [list] [network] clathrin vesicle coat  (10 genes)  IBA  
GO:0009504 [list] [network] cell plate  (34 genes)  IDA  
GO:0009524 [list] [network] phragmoplast  (89 genes)  IEA  
GO:0005856 [list] [network] cytoskeleton  (368 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0032050 [list] [network] clathrin heavy chain binding  (21 genes)  IBA  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
GO:0005198 [list] [network] structural molecule activity  (369 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_565921.1 
BLAST NP_565921.1 
Orthologous [Ortholog page] AT2G20760 (ath)  AT3G51890 (ath)  LOC4337419 (osa)  LOC4342159 (osa)  LOC7466063 (ppo)  LOC7488013 (ppo)  LOC7490332 (ppo)  LOC7494357 (ppo)  LOC9267670 (osa)  LOC11421620 (mtr)  LOC25493188 (mtr)  LOC25502062 (mtr)  LOC100216721 (zma)  LOC100248438 (vvi)  LOC100277113 (zma)  LOC100783050 (gma)  LOC100788673 (gma)  LOC100808804 (gma)  LOC100813474 (gma)  LOC100817703 (gma)  LOC100818117 (gma)  LOC100820255 (gma)  LOC100854215 (vvi)  LOC101250146 (sly)  LOC101261300 (sly)  LOC101263919 (sly)  LOC101266991 (sly)  LOC103632305 (zma)  LOC103842584 (bra)  LOC103846752 (bra)  LOC103857903 (bra)  LOC103863508 (bra)  LOC103865762 (bra)  LOC103866986 (bra)  LOC113475843 (zma) 
Subcellular
localization
wolf
nucl 10  (predict for NP_565921.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565921.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath03040 Spliceosome 2
Genes directly connected with CLC2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 SP1L3 SPIRAL1-like3 [detail] 821277
5.2 AT1G48160 signal recognition particle 19 kDa protein, putative / SRP19 [detail] 841235
5.0 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
Coexpressed
gene list		 [Coexpressed gene list for CLC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267360_at
267360_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267360_at
267360_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267360_at
267360_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818594      
Refseq ID (protein) NP_565921.1 


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