| functional annotation |
| Function |
Nop53 protein |
|
| GO BP |
|
GO:0010971 [list] [network] positive regulation of G2/M transition of mitotic cell cycle
|
(5 genes)
|
IMP
|
 |
|
GO:0051781 [list] [network] positive regulation of cell division
|
(14 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001078030.1
NP_001318390.1
NP_565931.1
|
| BLAST |
NP_001078030.1
NP_001318390.1
NP_565931.1
|
| Orthologous |
[Ortholog page]
LOC4337783 (osa)
LOC11429503 (mtr)
LOC100250159 (vvi)
LOC100282095 (zma)
LOC100797857 (gma)
LOC100802185 (gma)
LOC101265197 (sly)
LOC103865796 (bra)
LOC103866501 (bra)
|
Subcellular
localization
wolf |
|
nucl 4,
chlo 3,
mito 2,
cysk_nucl 2,
nucl_plas 2
|
(predict for NP_001078030.1)
|
|
nucl 4,
chlo 4,
mito 2,
cyto_nucl 2,
cysk_nucl 2,
nucl_plas 2
|
(predict for NP_001318390.1)
|
|
chlo 4,
nucl 4,
mito 2,
cyto_nucl 2
|
(predict for NP_565931.1)
|
|
Subcellular
localization
TargetP |
|
other 5,
mito 3
|
(predict for NP_001078030.1)
|
|
other 6,
mito 3
|
(predict for NP_001318390.1)
|
|
other 5,
mito 3
|
(predict for NP_565931.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03008 |
Ribosome biogenesis in eukaryotes |
3 |
 |
Genes directly connected with AT2G40430 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.7 |
AT3G01160 |
pre-rRNA-processing ESF1-like protein |
[detail] |
820504 |
| 12.6 |
AT5G50310 |
Galactose oxidase/kelch repeat superfamily protein |
[detail] |
835096 |
| 11.6 |
AT3G49990 |
Low temperature viability protein |
[detail] |
824161 |
| 11.1 |
SDN3 |
small RNA degrading nuclease 3 |
[detail] |
836859 |
| 9.7 |
AT1G43860 |
sequence-specific DNA binding transcription factor |
[detail] |
840982 |
| 9.1 |
AT1G12650 |
rRNA biogenesis RRP36-like protein |
[detail] |
837821 |
| 8.8 |
AT2G20280 |
Zinc finger C-x8-C-x5-C-x3-H type family protein |
[detail] |
816547 |
| 8.8 |
AT5G08420 |
RNA-binding KH domain-containing protein |
[detail] |
830741 |
| 8.5 |
AT2G25670 |
hypothetical protein |
[detail] |
817108 |
| 8.2 |
AT5G40530 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
834051 |
| 8.0 |
TPR3 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
839442 |
| 7.9 |
CER7 |
3'-5'-exoribonuclease family protein |
[detail] |
825221 |
| 7.6 |
FZF |
Zinc finger protein 622 |
[detail] |
816986 |
| 7.5 |
AT3G43590 |
zinc knuckle (CCHC-type) family protein |
[detail] |
823456 |
| 7.3 |
AT5G10010 |
myosin-H heavy protein |
[detail] |
830863 |
| 7.2 |
AT5G61330 |
rRNA processing protein-like protein |
[detail] |
836254 |
| 7.0 |
TFIIIA |
transcription factor IIIA |
[detail] |
843536 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT2G40430]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
263802_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
263802_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
263802_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT2G40430 Gene
