[←][→] ath   AT2G42740 Gene
functional annotation
Function   ribosomal protein large subunit 16A  
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (33 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  TAS  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (136 genes)  IBA IDA TAS  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_850376.2 
BLAST NP_850376.2 
Orthologous [Ortholog page] AT3G58700 (ath)  RPL16B (ath)  AT5G45775 (ath)  LOC4327087 (osa)  LOC4328826 (osa)  LOC4338077 (osa)  LOC4341262 (osa)  LOC11422951 (mtr)  LOC11426149 (mtr)  LOC11445039 (mtr)  LOC100192743 (zma)  LOC100193696 (zma)  LOC100193878 (zma)  LOC100243655 (vvi)  LOC100251464 (vvi)  LOC100282010 (zma)  LOC100283310 (zma)  LOC100305912 (gma)  LOC100778713 (gma)  LOC100791687 (gma)  LOC100810082 (gma)  LOC100812386 (gma)  LOC100819731 (gma)  LOC101246764 (sly)  LOC101259713 (sly)  LOC101262882 (sly)  LOC101268775 (sly)  LOC103827776 (bra)  LOC103841744 (bra)  LOC103853664 (bra)  LOC103856798 (bra)  LOC103861011 (bra)  LOC103862966 (bra) 
Subcellular
localization
wolf
cyto 5,  plas 3,  cyto_nucl 3  (predict for NP_850376.2)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_850376.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with RPL16A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT2G36160 Ribosomal protein S11 family protein [detail] 818188
8.9 AT2G36170 60S ribosomal protein L40-1 [detail] 818189
8.7 RPS11-BETA ribosomal protein S11-beta [detail] 832439
7.1 AT2G42730 F-box/FBD/LRR protein [detail] 818873
Coexpressed
gene list		 [Coexpressed gene list for RPL16A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263973_at
263973_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263973_at
263973_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263973_at
263973_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818874      
Refseq ID (protein) NP_850376.2 


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