ATTED-II : GeneID search result

[←][→] ath AT2G42940 Gene

functional annotation

Function

Putative AT-hook DNA-binding family protein

GO BP

GO:0010529 [list] [network] negative regulation of transposition	(2 genes)	IMP
GO:1900111 [list] [network] positive regulation of histone H3-K9 dimethylation	(3 genes)	IMP
GO:0035067 [list] [network] negative regulation of histone acetylation	(6 genes)	IMP
GO:0010208 [list] [network] pollen wall assembly	(42 genes)	IMP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem	(173 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA IDA ISM

GO MF

GO:0003680 [list] [network] AT DNA binding	(27 genes)	IBA
GO:0031490 [list] [network] chromatin DNA binding	(27 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IBA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_181822.1

BLAST

NP_181822.1

Orthologous

[Ortholog page] LOC7468736 (ppo) LOC11431956 (mtr) LOC100253941 (vvi) LOC100788581 (gma) LOC100804941 (gma) LOC101248406 (sly) LOC103858037 (bra) LOC103865973 (bra) LOC103866679 (bra)

Subcellular
localization
wolf

chlo 5, nucl 2, cyto 1, plas 1, cyto_plas 1

(predict for NP_181822.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_181822.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT2G42940]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265263_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265263_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265263_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818895
Refseq ID (protein)	NP_181822.1

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