[←][→] ath   AT2G43880 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_001324187.1  NP_181916.1 
BLAST NP_001324187.1  NP_181916.1 
Orthologous [Ortholog page] TAPG1 (sly)  TAPG4 (sly)  TAPG2 (sly)  AT2G43870 (ath)  AT2G43890 (ath)  AT3G59850 (ath)  AT1G05650 (ath)  AT1G05660 (ath)  LOC4326679 (osa)  LOC7464588 (ppo)  LOC7465609 (ppo)  LOC7469534 (ppo)  LOC7469535 (ppo)  LOC11411658 (mtr)  LOC11440395 (mtr)  LOC25500179 (mtr)  LOC100242164 (vvi)  LOC100250754 (vvi)  LOC100273291 (zma)  LOC100782500 (gma)  LOC100784002 (gma)  LOC100785701 (gma)  LOC100786608 (gma)  LOC100789818 (gma)  LOC100793088 (gma)  LOC100797183 (gma)  LOC100806846 (gma)  LOC100854108 (vvi)  TAPG5 (sly)  LOC101249666 (sly)  LOC101249943 (sly)  LOC101252557 (sly)  LOC101259412 (sly)  TPG7 (sly)  LOC101260614 (sly)  LOC101264596 (sly)  LOC101264897 (sly)  LOC101265207 (sly)  TPG6 (sly)  LOC103836520 (bra)  LOC103841831 (bra)  LOC103844104 (bra)  LOC103849973 (bra)  LOC103858105 (bra)  LOC103866111 (bra)  LOC103866112 (bra)  LOC103866113 (bra)  LOC103866751 (bra)  LOC103866752 (bra)  LOC103866753 (bra)  LOC104878208 (vvi)  LOC104878209 (vvi) 
Subcellular
localization
wolf
chlo 6,  extr 3  (predict for NP_001324187.1)
chlo 7,  extr 3  (predict for NP_181916.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001324187.1)
scret 9  (predict for NP_181916.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
Genes directly connected with AT2G43880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.1 AT5G51490 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 835223
9.0 AT3G59850 Pectin lyase-like superfamily protein [detail] 825155
8.6 AT1G05660 Pectin lyase-like superfamily protein [detail] 837073
7.6 EXPA17 expansin A17 [detail] 827983
3.9 AT1G57590 Pectinacetylesterase family protein [detail] 842135
Coexpressed
gene list		 [Coexpressed gene list for AT2G43880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267222_at
267222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267222_at
267222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267222_at
267222_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818992      
Refseq ID (protein) NP_001324187.1 
NP_181916.1 


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