[←][→] ath   AT2G47860 Gene
functional annotation
Function   Phototropic-responsive NPH3 family protein  
GO BP
GO:0009846 [list] [network] pollen germination  (67 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001189774.1  NP_001324534.1  NP_001324535.1  NP_001324536.1  NP_182307.1  NP_973711.1 
BLAST NP_001189774.1  NP_001324534.1  NP_001324535.1  NP_001324536.1  NP_182307.1  NP_973711.1 
Orthologous [Ortholog page] LOC103874619 (bra) 
Subcellular
localization
wolf
nucl 5,  chlo 4,  mito 1,  cysk 1  (predict for NP_001189774.1)
chlo 9,  chlo_mito 5  (predict for NP_001324534.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001324535.1)
chlo 6,  chlo_mito 4,  nucl 1,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001324536.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_182307.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_973711.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001189774.1)
chlo 8  (predict for NP_001324534.1)
other 9  (predict for NP_001324535.1)
chlo 7  (predict for NP_001324536.1)
chlo 8  (predict for NP_182307.1)
other 9  (predict for NP_973711.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SETH6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 RUL1 Leucine-rich repeat protein kinase family protein [detail] 830398
6.3 MAKR4 membrane-associated kinase regulator [detail] 818522
6.1 HB-8 homeobox-leucine zipper protein ATHB-8 [detail] 829424
6.0 DTA4 downstream target of AGL15-4 [detail] 844315
5.7 BRL1 BRI1 like [detail] 842010
5.5 UCNL AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [detail] 821631
5.0 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein [detail] 822289
Coexpressed
gene list		 [Coexpressed gene list for SETH6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266507_at
266507_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266507_at
266507_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266507_at
266507_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819398      
Refseq ID (protein) NP_001189774.1 
NP_001324534.1 
NP_001324535.1 
NP_001324536.1 
NP_182307.1 
NP_973711.1 


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