[←][→] ath   AT2G47970 Gene
functional annotation
Function   Nuclear pore localization protein NPL4  
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IBA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_566118.1  NP_973714.1 
BLAST NP_566118.1  NP_973714.1 
Orthologous [Ortholog page] NPL41 (ath)  LOC4325451 (osa)  LOC7466262 (ppo)  LOC7481454 (ppo)  LOC25499572 (mtr)  LOC100194136 (zma)  LOC100242502 (vvi)  LOC100273080 (zma)  LOC100779549 (gma)  LOC100811623 (gma)  LOC101248688 (sly)  LOC103862741 (bra) 
Subcellular
localization
wolf
cyto 5,  mito 4,  chlo 1,  plas 1  (predict for NP_566118.1)
mito 4,  cyto 3,  chlo_mito 3,  mito_plas 3  (predict for NP_973714.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for NP_566118.1)
mito 5,  other 5  (predict for NP_973714.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT2G47970 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT3G58630 sequence-specific DNA binding transcription factor [detail] 825032
8.3 AT3G63220 Galactose oxidase/kelch repeat superfamily protein [detail] 825497
8.1 FIP1 FH interacting protein 1 [detail] 839714
7.8 HDA6 histone deacetylase 6 [detail] 836431
7.5 AT3G05545 RING/U-box superfamily protein [detail] 819720
7.3 AT4G10750 Phosphoenolpyruvate carboxylase family protein [detail] 826669
6.8 AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836117
5.7 GAE3 UDP-D-glucuronate 4-epimerase 3 [detail] 828145
5.3 EMB1793 LYR family of Fe/S cluster biogenesis protein [detail] 843938
4.5 AT1G17160 pfkB-like carbohydrate kinase family protein [detail] 838287
Coexpressed
gene list		 [Coexpressed gene list for AT2G47970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266459_at
266459_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266459_at
266459_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266459_at
266459_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819409      
Refseq ID (protein) NP_566118.1 
NP_973714.1 


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