[←][→] ath   AT2G48100 Gene
functional annotation
Function   Exonuclease family protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG
Protein NP_001031560.1  NP_001031561.1  NP_001318445.1  NP_001323898.1  NP_001323899.1  NP_001323900.1  NP_566124.1  NP_973715.1 
BLAST NP_001031560.1  NP_001031561.1  NP_001318445.1  NP_001323898.1  NP_001323899.1  NP_001323900.1  NP_566124.1  NP_973715.1 
Orthologous [Ortholog page] LOC11436346 (mtr)  LOC100259575 (vvi)  LOC100788682 (gma)  LOC100805841 (gma)  LOC101249487 (sly)  LOC103866328 (bra) 
Subcellular
localization
wolf
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_001031560.1)
nucl 7,  mito 1,  cyto_mito 1  (predict for NP_001031561.1)
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_001318445.1)
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_001323898.1)
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_001323899.1)
nucl 7,  mito 1,  cyto_mito 1  (predict for NP_001323900.1)
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_566124.1)
nucl 8,  mito 1,  cyto_mito 1  (predict for NP_973715.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001031560.1)
other 5,  mito 4  (predict for NP_001031561.1)
other 5,  mito 4  (predict for NP_001318445.1)
other 5,  mito 4  (predict for NP_001323898.1)
other 5,  mito 4  (predict for NP_001323899.1)
other 5,  mito 4  (predict for NP_001323900.1)
other 5,  mito 4  (predict for NP_566124.1)
other 5,  mito 4  (predict for NP_973715.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
Genes directly connected with AT2G48100 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
6.8 SCL33 SC35-like splicing factor 33 [detail] 841976
6.4 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 820545
5.9 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 844417
5.8 AT3G02280 Flavodoxin family protein [detail] 820417
5.5 HDA15 histone deacetylase 15 [detail] 821382
5.5 AT1G73875 DNAse I-like superfamily protein [detail] 843724
Coexpressed
gene list		 [Coexpressed gene list for AT2G48100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265770_at
265770_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265770_at
265770_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265770_at
265770_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819422      
Refseq ID (protein) NP_001031560.1 
NP_001031561.1 
NP_001318445.1 
NP_001323898.1 
NP_001323899.1 
NP_001323900.1 
NP_566124.1 
NP_973715.1 


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