[←][→] ath   AT2G48120 Gene
functional annotation
Function   pale cress protein (PAC)  
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (8 genes)  IMP  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IMP  
GO:0009965 [list] [network] leaf morphogenesis  (96 genes)  IBA IMP  
GO:0071482 [list] [network] cellular response to light stimulus  (131 genes)  IBA IEP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IBA IMP  
GO:0042254 [list] [network] ribosome biogenesis  (378 genes)  IMP  
GO:0016070 [list] [network] RNA metabolic process  (1305 genes)  IEP IMP  
GO CC
GO:0009537 [list] [network] proplastid  (2 genes)  IBA IDA  
GO:0009513 [list] [network] etioplast  (4 genes)  IBA IDA  
GO:0009509 [list] [network] chromoplast  (5 genes)  IBA IDA  
GO:0009501 [list] [network] amyloplast  (11 genes)  IBA IDA  
GO:0042644 [list] [network] chloroplast nucleoid  (44 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA IMP ISM  
GO MF
GO:0043621 [list] [network] protein self-association  (96 genes)  IDA  
GO:0019843 [list] [network] rRNA binding  (99 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA IPI  
KEGG
Protein NP_001078079.1  NP_182332.1 
BLAST NP_001078079.1  NP_182332.1 
Orthologous [Ortholog page] LOC4338694 (osa)  LOC7466274 (ppo)  LOC11424433 (mtr)  LOC100249345 (vvi)  LOC100283570 (zma)  LOC100802895 (gma)  LOC101250047 (sly)  LOC103866326 (bra)  LOC103867720 (bra) 
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_001078079.1)
chlo 9,  cyto 1,  mito 1  (predict for NP_182332.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001078079.1)
chlo 8  (predict for NP_182332.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PAC on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 FSD3 Fe superoxide dismutase 3 [detail] 832395
7.0 PTAC12 plastid transcriptionally active 12 [detail] 818029
6.2 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [detail] 820508
Coexpressed
gene list		 [Coexpressed gene list for PAC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262316_at
262316_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262316_at
262316_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262316_at
262316_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819424      
Refseq ID (protein) NP_001078079.1 
NP_182332.1 


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