[←][→] ath   AT3G04670 Gene
functional annotation
Function   WRKY DNA-binding protein 39  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IC ISM  
GO MF
GO:0005516 [list] [network] calmodulin binding  (182 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_001030634.1  NP_566236.1 
BLAST NP_001030634.1  NP_566236.1 
Orthologous [Ortholog page] LOC543857 (sly)  WRKYIId (sly)  LOC732738 (zma)  WRKY21 (ath)  WRKY74 (ath)  LOC4334062 (osa)  LOC4352708 (osa)  LOC7476889 (ppo)  LOC7479993 (ppo)  LOC25484338 (mtr)  WRKY15 (gma)  WRKY22 (gma)  LOC100191630 (zma)  LOC100192894 (zma)  LOC100216719 (zma)  LOC100254726 (vvi)  LOC100257874 (vvi)  LOC100280700 (zma)  LOC100284463 (zma)  LOC100792310 (gma)  LOC103849134 (bra)  LOC103854626 (bra)  LOC103857329 (bra)  LOC103859050 (bra)  LOC103865057 (bra)  LOC103867943 (bra)  WRKY39 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001030634.1)
nucl 9  (predict for NP_566236.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001030634.1)
other 7,  chlo 3  (predict for NP_566236.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with WRKY39 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT4G01960 transmembrane protein [detail] 828190
5.1 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 839446
5.1 RVE2 Homeodomain-like superfamily protein [detail] 833700
5.0 FBW2 F-BOX WITH WD-40 2 [detail] 826476
5.0 AT4G25690 stress response NST1-like protein [detail] 828674
4.7 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family protein [detail] 835647
4.0 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 837078
4.0 AT2G22420 Peroxidase superfamily protein [detail] 816773
Coexpressed
gene list		 [Coexpressed gene list for WRKY39]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258803_at
258803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258803_at
258803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258803_at
258803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819625      
Refseq ID (protein) NP_001030634.1 
NP_566236.1 


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