[←][→] ath   AT3G05090 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:1903003 [list] [network] positive regulation of protein deubiquitination  (1 genes)  IBA  
GO:0010311 [list] [network] lateral root formation  (55 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IBA  
KEGG
Protein NP_001325515.1  NP_566246.1  NP_850516.1 
BLAST NP_001325515.1  NP_566246.1  NP_850516.1 
Orthologous [Ortholog page] LOC4351590 (osa)  LOC11433323 (mtr)  LOC25484665 (mtr)  LOC100248769 (vvi)  LOC100775985 (gma)  LOC100788971 (gma)  LOC100791786 (gma)  LOC100792334 (gma)  LOC101244688 (sly)  LOC101249305 (sly)  LOC103640814 (zma)  LOC103650664 (zma)  LOC103859075 (bra)  LOC103870857 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_001325515.1)
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_566246.1)
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_850516.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_001325515.1)
other 6,  mito 4  (predict for NP_566246.1)
other 6,  mito 4  (predict for NP_850516.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with LRS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 UPL6 ubiquitin protein ligase 6 [detail] 820979
6.4 SIZ1 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein [detail] 836163
6.3 PP2AA2 protein phosphatase 2A subunit A2 [detail] 822171
Coexpressed
gene list		 [Coexpressed gene list for LRS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259313_at
259313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259313_at
259313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259313_at
259313_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819671      
Refseq ID (protein) NP_001325515.1 
NP_566246.1 
NP_850516.1 


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