[←][→] ath   AT3G06290 Gene
functional annotation
Function   SAC3/GANP/Nin1/mts3/eIF-3 p25 family  
GO BP
GO:0090065 [list] [network] regulation of production of siRNA involved in RNA interference  (5 genes)  IMP  
GO:0044030 [list] [network] regulation of DNA methylation  (15 genes)  IMP  
GO:0006406 [list] [network] mRNA export from nucleus  (30 genes)  IBA  
GO:0060968 [list] [network] regulation of gene silencing  (60 genes)  IMP  
GO CC
GO:0070390 [list] [network] transcription export complex 2  (3 genes)  IBA  
GO:0034399 [list] [network] nuclear periphery  (19 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
KEGG
Protein NP_001327776.1  NP_001327777.1  NP_001327778.1  NP_187280.3 
BLAST NP_001327776.1  NP_001327777.1  NP_001327778.1  NP_187280.3 
Orthologous [Ortholog page] LOC11441873 (mtr)  LOC100266559 (vvi)  LOC100777150 (gma)  LOC100817727 (gma)  LOC101253869 (sly)  LOC103632084 (zma)  LOC103633501 (zma)  LOC103633502 (zma)  LOC103633506 (zma)  LOC103634424 (zma)  LOC103854469 (bra)  LOC103859148 (bra)  LOC107278765 (osa) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327776.1)
chlo 6,  nucl 2,  mito 1,  cysk_nucl 1  (predict for NP_001327777.1)
nucl 6,  cyto 2,  chlo 1,  vacu 1,  cysk 1  (predict for NP_001327778.1)
chlo 5,  nucl 3,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_187280.3)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001327776.1)
chlo 5  (predict for NP_001327777.1)
other 8  (predict for NP_001327778.1)
other 5,  mito 3  (predict for NP_187280.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with SAC3B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G53780 26S proteasome regulatory complex ATPase [detail] 841815
7.1 SUA suppressor of abi3-5 [detail] 824590
7.1 AT1G70620 cyclin-like protein [detail] 843399
6.2 AT3G13225 WW domain-containing protein [detail] 820517
3.6 HAC4 histone acetyltransferase of the CBP family 4 [detail] 842048
Coexpressed
gene list		 [Coexpressed gene list for SAC3B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256394_at
256394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256394_at
256394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256394_at
256394_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819803      
Refseq ID (protein) NP_001327776.1 
NP_001327777.1 
NP_001327778.1 
NP_187280.3 


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