[←][→] ath   AT3G06330 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001078114.1  NP_001319485.1  NP_001327571.1  NP_566281.1 
BLAST NP_001078114.1  NP_001319485.1  NP_001327571.1  NP_566281.1 
Orthologous [Ortholog page] AT5G18760 (ath)  LOC11446862 (mtr)  LOC100259554 (vvi)  LOC100527094 (gma)  LOC100777100 (gma)  LOC101264251 (sly)  LOC103849984 (bra)  LOC103851193 (bra)  LOC103854472 (bra)  LOC103859152 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  extr 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001078114.1)
nucl 3,  chlo 2,  nucl_plas 2,  plas 1,  E.R. 1,  pero 1,  cyto_nucl 1,  chlo_mito 1,  cysk_nucl 1,  E.R._plas 1  (predict for NP_001319485.1)
chlo 8,  plas 1  (predict for NP_001327571.1)
cyto 3,  plas 3,  cyto_plas 3,  nucl 2  (predict for NP_566281.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for NP_001078114.1)
other 4,  mito 3  (predict for NP_001319485.1)
chlo 8  (predict for NP_001327571.1)
chlo 6,  other 4  (predict for NP_566281.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G06330 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 AT3G03870 transmembrane protein [detail] 821099
4.5 AT5G54585 hypothetical protein [detail] 835547
4.5 AT5G47390 myb-like transcription factor family protein [detail] 834786
Coexpressed
gene list		 [Coexpressed gene list for AT3G06330]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258882_at
258882_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258882_at
258882_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258882_at
258882_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819807      
Refseq ID (protein) NP_001078114.1 
NP_001319485.1 
NP_001327571.1 
NP_566281.1 


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