[←][→] ath   AT3G07360 Gene
functional annotation
Function   plant U-box 9  
GO BP
GO:0048527 [list] [network] lateral root development  (117 genes)  IGI  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (194 genes)  IEA  
GO:0071215 [list] [network] cellular response to abscisic acid stimulus  (223 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0070696 [list] [network] transmembrane receptor protein serine/threonine kinase binding  (8 genes)  IPI  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
KEGG
Protein NP_001030656.1  NP_001319492.1  NP_001327371.1  NP_001327372.1  NP_001327373.1  NP_001327374.1  NP_001327375.1  NP_001327376.1  NP_566304.1  NP_850531.1 
BLAST NP_001030656.1  NP_001319492.1  NP_001327371.1  NP_001327372.1  NP_001327373.1  NP_001327374.1  NP_001327375.1  NP_001327376.1  NP_566304.1  NP_850531.1 
Orthologous [Ortholog page] LOC4335543 (osa)  LOC7471176 (ppo)  LOC9267566 (osa)  LOC11435107 (mtr)  LOC11435137 (mtr)  LOC25498179 (mtr)  LOC100264137 (vvi)  LOC100267223 (vvi)  LOC100284415 (zma)  LOC100776534 (gma)  LOC100777031 (gma)  LOC100806132 (gma)  LOC100806619 (gma)  LOC100809408 (gma)  LOC101259432 (sly)  LOC101262653 (sly)  LOC103849333 (bra)  LOC103859214 (bra)  LOC103870676 (bra) 
Subcellular
localization
wolf
cyto 9,  nucl 1,  mito 1  (predict for NP_001030656.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001319492.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327371.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327372.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327373.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327374.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327375.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001327376.1)
cyto 6,  nucl 2,  chlo 1  (predict for NP_566304.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_850531.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001030656.1)
other 7  (predict for NP_001319492.1)
other 7  (predict for NP_001327371.1)
other 7  (predict for NP_001327372.1)
other 7  (predict for NP_001327373.1)
other 7  (predict for NP_001327374.1)
other 7  (predict for NP_001327375.1)
other 7  (predict for NP_001327376.1)
other 8  (predict for NP_566304.1)
other 7  (predict for NP_850531.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB9 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AT5G65470 O-fucosyltransferase family protein [detail] 836672
6.0 AT2G45820 Remorin family protein [detail] 819190
5.7 AT1G27200 glycosyltransferase family protein (DUF23) [detail] 839609
5.5 SLK2 SEUSS-like 2 [detail] 836329
4.9 AT4G38730 magnesium transporter, putative (DUF803) [detail] 830028
Coexpressed
gene list		 [Coexpressed gene list for PUB9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259012_at
259012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259012_at
259012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259012_at
259012_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819924      
Refseq ID (protein) NP_001030656.1 
NP_001319492.1 
NP_001327371.1 
NP_001327372.1 
NP_001327373.1 
NP_001327374.1 
NP_001327375.1 
NP_001327376.1 
NP_566304.1 
NP_850531.1 


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