| functional annotation |
| Function |
NAC domain containing protein 50 |
|
| GO BP |
|
GO:0034720 [list] [network] histone H3-K4 demethylation
|
(4 genes)
|
IMP
|
 |
|
GO:0060966 [list] [network] regulation of gene silencing by RNA
|
(22 genes)
|
IMP
|
|
|
GO:0048573 [list] [network] photoperiodism, flowering
|
(67 genes)
|
IMP
|
|
|
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem
|
(173 genes)
|
IGI
|
|
|
GO:0006351 [list] [network] transcription, DNA-templated
|
(186 genes)
|
IDA
|
|
|
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated
|
(253 genes)
|
IDA
IMP
|
|
|
GO:0009908 [list] [network] flower development
|
(447 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0000976 [list] [network] transcription regulatory region sequence-specific DNA binding
|
(204 genes)
|
IDA
|
|
|
GO:0043565 [list] [network] sequence-specific DNA binding
|
(796 genes)
|
IDA
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
IDA
ISS
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001154602.1
NP_566374.1
NP_974272.1
|
| BLAST |
NP_001154602.1
NP_566374.1
NP_974272.1
|
| Orthologous |
[Ortholog page]
NAC052 (ath)
LOC7463465 (ppo)
LOC25484825 (mtr)
LOC100265122 (vvi)
LOC100782028 (gma)
LOC100808783 (gma)
LOC101265545 (sly)
LOC103847517 (bra)
LOC103847527 (bra)
LOC103859348 (bra)
LOC103859349 (bra)
LOC103870463 (bra)
LOC108178985 (sly)
|
Subcellular
localization
wolf |
|
chlo 6,
vacu 2,
nucl 1,
mito 1,
golg 1
|
(predict for NP_001154602.1)
|
|
chlo 6,
nucl 4
|
(predict for NP_566374.1)
|
|
chlo 8,
nucl 1
|
(predict for NP_974272.1)
|
|
Subcellular
localization
TargetP |
|
scret 3,
chlo 3
|
(predict for NP_001154602.1)
|
|
chlo 3
|
(predict for NP_566374.1)
|
|
chlo 3
|
(predict for NP_974272.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03040 |
Spliceosome |
7 |
 |
Genes directly connected with NAC050 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 10.7 |
NAC052 |
NAC domain containing protein 52 |
[detail] |
820213 |
| 5.2 |
SRO1 |
similar to RCD one 1 |
[detail] |
818116 |
| 5.0 |
RS41 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
[detail] |
835279 |
|
Coexpressed
gene list |
[Coexpressed gene list for NAC050]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AT3G10480 Gene
