[←][→] ath   AT3G10640 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0032585 [list] [network] multivesicular body membrane  (7 genes)  IEA  
GO:0005771 [list] [network] multivesicular body  (20 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_187675.2  NP_974273.1 
BLAST NP_187675.2  NP_974273.1 
Orthologous [Ortholog page] LOC4337536 (osa)  LOC7490888 (ppo)  LOC9266052 (osa)  LOC11418361 (mtr)  LOC100240918 (vvi)  LOC100244534 (vvi)  LOC100273036 (zma)  LOC100284928 (zma)  LOC100306149 (gma)  LOC100527083 (gma)  LOC101248200 (sly)  LOC101259697 (sly)  LOC103855589 (bra)  LOC103859354 (bra) 
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_187675.2)
nucl 6,  nucl_plas 4,  mito 1,  chlo 1,  cyto 1,  cyto_mito 1  (predict for NP_974273.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_187675.2)
mito 6,  other 6  (predict for NP_974273.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath04144 Endocytosis 2
Genes directly connected with VPS60.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 GILP GSH-induced LITAF domain protein [detail] 831158
7.2 VPS2.1 SNF7 family protein [detail] 815211
6.8 NUDT7 MutT/nudix family protein [detail] 826884
6.6 AT4G33940 RING/U-box superfamily protein [detail] 829539
5.9 AT3G58600 Adaptin ear-binding coat-associated protein 1 NECAP-1 [detail] 825029
5.7 AT2G41835 zinc finger (C2H2 type, AN1-like) family protein [detail] 818783
5.0 UBC16 ubiquitin-conjugating enzyme 16 [detail] 843880
Coexpressed
gene list		 [Coexpressed gene list for VPS60.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258915_at
258915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258915_at
258915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258915_at
258915_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820233      
Refseq ID (protein) NP_187675.2 
NP_974273.1 


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