[←][→] ath   AT3G11500 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein  
GO BP
GO CC
GO:0034719 [list] [network] SMN-Sm protein complex  (4 genes)  IBA  
GO:0043186 [list] [network] P granule  (5 genes)  IBA  
GO:0005687 [list] [network] U4 snRNP  (9 genes)  IBA  
GO:0005682 [list] [network] U5 snRNP  (15 genes)  IBA  
GO:0005685 [list] [network] U1 snRNP  (17 genes)  IBA  
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA  
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0005686 [list] [network] U2 snRNP  (32 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001319523.1  NP_187757.1 
BLAST NP_001319523.1  NP_187757.1 
Orthologous [Ortholog page] SNRNP-G (ath)  LOC4333092 (osa)  LOC4343870 (osa)  LOC7465260 (ppo)  LOC7492248 (ppo)  LOC11442022 (mtr)  LOC25496613 (mtr)  LOC100193784 (zma)  LOC100247783 (vvi)  LOC100282336 (zma)  LOC100305530 (gma)  LOC100500333 (gma)  LOC100799718 (gma)  LOC101245652 (sly)  LOC101264989 (sly)  LOC103845971 (bra)  LOC103864505 (bra)  LOC103870221 (bra)  LOC103870338 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  extr 1  (predict for NP_001319523.1)
cyto 6,  chlo 1,  extr 1  (predict for NP_187757.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001319523.1)
other 6  (predict for NP_187757.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath03040 Spliceosome 5
ath03440 Homologous recombination 2
Genes directly connected with AT3G11500 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 SNRNP-G Putative small nuclear ribonucleoprotein G [detail] 816925
7.6 LSM2 Small nuclear ribonucleoprotein family protein [detail] 839526
7.3 AT4G33865 Ribosomal protein S14p/S29e family protein [detail] 829529
6.7 AT4G35980 hypothetical protein [detail] 829752
5.5 AT4G18590 Nucleic acid-binding, OB-fold-like protein [detail] 827591
4.9 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein [detail] 814638
Coexpressed
gene list		 [Coexpressed gene list for AT3G11500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259288_at
259288_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259288_at
259288_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259288_at
259288_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820323      
Refseq ID (protein) NP_001319523.1 
NP_187757.1 


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