[←][→] ath   AT3G11600 Gene
functional annotation
Function   E3 ubiquitin-protein ligase  
GO BP
GO:0080147 [list] [network] root hair cell development  (89 genes)  IGI  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_566393.1 
BLAST NP_566393.1 
Orthologous [Ortholog page] AT5G06270 (ath)  AT5G22270 (ath)  LOC4324785 (osa)  LOC4329572 (osa)  LOC4333631 (osa)  LOC4335802 (osa)  LOC4337455 (osa)  AT3G52561 (ath)  LOC7491611 (ppo)  LOC9272510 (osa)  LOC11414950 (mtr)  LOC25483761 (mtr)  LOC25492242 (mtr)  LOC25499448 (mtr)  LOC100241706 (vvi)  LOC100266492 (vvi)  LOC100275227 (zma)  LOC100277418 (zma)  LOC100277613 (zma)  LOC100278661 (zma)  LOC100306500 (gma)  LOC100775986 (gma)  LOC100788969 (gma)  LOC100805043 (gma)  LOC100815215 (gma)  LOC101253518 (sly)  LOC102666286 (gma)  LOC102667525 (gma)  LOC103627243 (zma)  LOC103646490 (zma)  LOC103845559 (bra)  LOC103846121 (bra)  LOC103846966 (bra)  LOC103850614 (bra)  LOC103851430 (bra)  LOC103855667 (bra)  LOC103856507 (bra)  LOC103859400 (bra)  LOC106797939 (gma)  LOC107403239 (zma)  LOC107546757 (zma)  LOC112999568 (gma) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 3  (predict for NP_566393.1)
Subcellular
localization
TargetP
chlo 7,  mito 7  (predict for NP_566393.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G11600 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 AT5G06270 hypothetical protein [detail] 830515
5.1 GL2 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [detail] 844323
4.1 AT2G33850 E6-like protein [detail] 817954
Coexpressed
gene list		 [Coexpressed gene list for AT3G11600]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259235_at
259235_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259235_at
259235_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259235_at
259235_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820333      
Refseq ID (protein) NP_566393.1 


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