[][] ath   AT3G11770 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H-like superfamily protein
GO BP
GO:2000630 [list] [network] positive regulation of miRNA metabolic process  (3 genes)  IMP  
GO:0031047 [list] [network] gene silencing by RNA  (183 genes)  IEA  
GO CC
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA  
GO MF
GO:1905172 [list] [network] RISC complex binding  (2 genes)  IDA  
GO:0008859 [list] [network] exoribonuclease II activity  (3 genes)  IEA  
GO:0008310 [list] [network] single-stranded DNA 3'-5' exodeoxyribonuclease activity  (4 genes)  IDA  
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IBA  
GO:0043621 [list] [network] protein self-association  (96 genes)  IDA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_187783.1 
BLAST NP_187783.1 
Orthologous [Ortholog page] LOC103870311 (bra)
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_187783.1)
Subcellular
localization
TargetP
other 8  (predict for NP_187783.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
Genes directly connected with AT3G11770 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.6 AT2G44525 NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) [detail] 819060
6.5 NRPB8A RNA polymerase Rpb8 [detail] 841866
6.2 MBD02 methyl-CPG-binding domain protein 02 [detail] 833487
4.4 ATHAL3B Flavoprotein [detail] 2745818
Coexpressed
gene list
[Coexpressed gene list for AT3G11770]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258784_at
258784_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258784_at
258784_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258784_at
258784_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820351    
Refseq ID (protein) NP_187783.1 


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