[←][→] ath   AT3G12070 Gene
functional annotation
Function   RAB geranylgeranyl transferase beta subunit 2  
GO BP
GO:0018344 [list] [network] protein geranylgeranylation  (7 genes)  IBA IDA  
GO:0018342 [list] [network] protein prenylation  (10 genes)  IBA  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO CC
GO:0005968 [list] [network] Rab-protein geranylgeranyltransferase complex  (5 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO MF
GO:0004663 [list] [network] Rab geranylgeranyltransferase activity  (4 genes)  IBA IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001327836.1  NP_001327837.1  NP_187814.1  NP_850567.1 
BLAST NP_001327836.1  NP_001327837.1  NP_187814.1  NP_850567.1 
Orthologous [Ortholog page] RGTB1 (ath)  LOC4346013 (osa)  LOC7481716 (ppo)  LOC25485517 (mtr)  LOC100193289 (zma)  LOC100253446 (vvi)  LOC100255737 (vvi)  LOC100777273 (gma)  LOC100793642 (gma)  LOC101247306 (sly)  LOC101247700 (sly)  LOC103846658 (bra)  LOC107277250 (osa)  LOC112417483 (mtr) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for NP_001327836.1)
cyto 6,  nucl 2,  chlo 1  (predict for NP_001327837.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for NP_187814.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for NP_850567.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001327836.1)
other 6  (predict for NP_001327837.1)
other 6  (predict for NP_187814.1)
other 6  (predict for NP_850567.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RGTB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 AT3G15351 P53/DNA damage-regulated protein [detail] 820769
5.0 AT5G01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [detail] 831786
4.4 AT2G42640 Mitogen activated protein kinase kinase kinase-like protein [detail] 818864
Coexpressed
gene list		 [Coexpressed gene list for RGTB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256276_at
256276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256276_at
256276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256276_at
256276_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820381      
Refseq ID (protein) NP_001327836.1 
NP_001327837.1 
NP_187814.1 
NP_850567.1 


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