[←][→] ath   AT3G12130 Gene
functional annotation
Function   KH domain-containing protein / zinc finger (CCCH type) family protein  
GO BP
GO:1900057 [list] [network] positive regulation of leaf senescence  (16 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IGI  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001327732.1  NP_566412.1 
BLAST NP_001327732.1  NP_566412.1 
Orthologous [Ortholog page] AT5G06770 (ath)  LOC4328599 (osa)  LOC4337319 (osa)  LOC4341537 (osa)  LOC7455767 (ppo)  LOC7461390 (ppo)  LOC7468933 (ppo)  LOC11430803 (mtr)  LOC11446765 (mtr)  LOC25483515 (mtr)  LOC100191185 (zma)  LOC100191993 (zma)  LOC100192020 (zma)  LOC100240955 (vvi)  LOC100245220 (vvi)  LOC100263958 (vvi)  LOC100284355 (zma)  LOC100777939 (gma)  LOC100778470 (gma)  LOC100792652 (gma)  LOC100803981 (gma)  LOC100817463 (gma)  LOC100818781 (gma)  LOC101251616 (sly)  LOC101252539 (sly)  LOC101262368 (sly)  LOC101262841 (sly)  LOC101267206 (sly)  LOC103845792 (bra)  LOC103859428 (bra)  LOC103870275 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001327732.1)
nucl 9  (predict for NP_566412.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for NP_001327732.1)
other 8  (predict for NP_566412.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G12130 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 FYPP1 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 841459
6.6 AL7 alfin-like 7 [detail] 838013
6.6 AT1G80040 ubiquitin system component Cue [detail] 844344
6.4 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 817767
5.4 DRL1 KTI12-like, chromatin associated protein [detail] 837946
4.6 AGL18 AGAMOUS-like 18 [detail] 824906
Coexpressed
gene list		 [Coexpressed gene list for AT3G12130]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256278_at
256278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256278_at
256278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256278_at
256278_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820388      
Refseq ID (protein) NP_001327732.1 
NP_566412.1 


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