ATTED-II : GeneID search result

[←][→] ath AT3G12220 Gene

functional annotation

Function

serine carboxypeptidase-like 16

GO BP

GO:0019748 [list] [network] secondary metabolic process	(318 genes)	IBA
GO:0006508 [list] [network] proteolysis	(901 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region	(3363 genes)	IEA ISM
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0004185 [list] [network] serine-type carboxypeptidase activity

(50 genes)

IEA

KEGG

Protein

NP_001327318.1 NP_001327319.1 NP_566414.3

BLAST

NP_001327318.1 NP_001327319.1 NP_566414.3

Orthologous

[Ortholog page] SCPL12 (ath) SCPL11 (ath) SCPL13 (ath) SNG1 (ath) scpl10 (ath) SCPL9 (ath) SCPL7 (ath) scpl17 (ath) scpl14 (ath) SCPL15 (ath) SCPL19 (ath) scpl1 (ath) scpl18 (ath) scpl6 (ath) scpl3 (ath) scpl5 (ath) scpl2 (ath) scpl4 (ath) LOC4330362 (osa) LOC4335083 (osa) LOC4347941 (osa) LOC4350396 (osa) LOC4350401 (osa) LOC4350472 (osa) LOC4350473 (osa) LOC7478668 (ppo) LOC9267355 (osa) LOC9268942 (osa) LOC9269030 (osa) LOC9271773 (osa) LOC11414298 (mtr) LOC11414299 (mtr) LOC11414606 (mtr) LOC11419263 (mtr) LOC11421514 (mtr) LOC11423210 (mtr) LOC11437807 (mtr) LOC11438858 (mtr) LOC11440819 (mtr) LOC25491575 (mtr) LOC100217293 (zma) LOC100242950 (vvi) LOC100246323 (vvi) LOC100247920 (vvi) LOC100249719 (vvi) LOC100253044 (vvi) LOC100253211 (vvi) LOC100255717 (vvi) LOC100256695 (vvi) LOC100258422 (vvi) LOC100265066 (vvi) LOC100265220 (vvi) LOC100267207 (vvi) LOC100282871 (zma) LOC100284785 (zma) LOC100780069 (gma) LOC100792006 (gma) LOC100794342 (gma) LOC100801015 (gma) LOC101250687 (sly) LOC101260582 (sly) LOC101261173 (sly) LOC101261227 (sly) LOC101266126 (sly) LOC101268653 (sly) LOC103626303 (zma) LOC103646387 (zma) LOC103828800 (bra) LOC103829513 (bra) LOC103830756 (bra) LOC103830757 (bra) LOC103831815 (bra) LOC103840196 (bra) LOC103840308 (bra) LOC103842453 (bra) LOC103845655 (bra) LOC103845689 (bra) LOC103846315 (bra) LOC103847220 (bra) LOC103847221 (bra) LOC103850370 (bra) LOC103850371 (bra) LOC103851060 (bra) LOC103856206 (bra) LOC103858396 (bra) LOC103859433 (bra) LOC103859434 (bra) LOC103863921 (bra) LOC103863958 (bra) LOC103864442 (bra) LOC103870465 (bra) LOC104647190 (sly) LOC104647191 (sly) LOC104647586 (sly) LOC107275596 (osa) LOC107276283 (osa) LOC107276517 (osa) LOC107277598 (osa) LOC112421300 (mtr) LOC112940472 (sly)

Subcellular
localization
wolf

cyto 3, chlo 2, cyto_plas 2, plas 1, extr 1, cyto_E.R. 1	(predict for NP_001327318.1)
nucl 7, cyto 2	(predict for NP_001327319.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_566414.3)

Subcellular
localization
TargetP

scret 9	(predict for NP_001327318.1)
other 6	(predict for NP_001327319.1)
scret 9	(predict for NP_566414.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	3

Genes directly connected with scpl16 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.0	AT5G09290	Inositol monophosphatase family protein	[detail]	830788
5.7	AT1G56120	Leucine-rich repeat transmembrane protein kinase	[detail]	842064
5.6	AT4G22305	alpha/beta-Hydrolases superfamily protein	[detail]	10723040

Coexpressed
gene list

[Coexpressed gene list for scpl16]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256265_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256265_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256265_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820402
Refseq ID (protein)	NP_001327318.1
	NP_001327319.1
	NP_566414.3

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