[←][→] ath   AT3G14400 Gene
functional annotation
Function   ubiquitin-specific protease 25  
GO BP
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (66 genes)  IBA  
KEGG
Protein NP_566486.1 
BLAST NP_566486.1 
Orthologous [Ortholog page] LOC4339279 (osa)  LOC25487057 (mtr)  LOC100253154 (vvi)  LOC100281515 (zma)  LOC100775539 (gma)  LOC100820436 (gma)  LOC101243726 (sly)  LOC103635830 (zma)  LOC103870030 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 3,  cyto_nucl 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_566486.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_566486.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath00790 Folate biosynthesis 2
Genes directly connected with UBP25 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 UBP24 ubiquitin-specific protease 24 [detail] 829213
7.7 ECT7 evolutionarily conserved C-terminal region 7 [detail] 841229
7.5 ELM1 fission ELM1-like protein (DUF1022) [detail] 832295
7.4 ML1 MEI2-like protein 1 [detail] 836317
6.9 AT1G22730 MA3 domain-containing protein [detail] 838879
5.9 APC3 Mitochondrial substrate carrier family protein [detail] 830623
5.7 AT2G44970 alpha/beta-Hydrolases superfamily protein [detail] 819105
5.6 NDT2 NAD+ transporter 2 [detail] 839124
5.3 AT5G49220 hypothetical protein (DUF789) [detail] 834982
Coexpressed
gene list		 [Coexpressed gene list for UBP25]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258372_at
258372_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258372_at
258372_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258372_at
258372_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820662      
Refseq ID (protein) NP_566486.1 


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