[←][→] ath   AT3G16650 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (8 genes)  IBA  
GO:0000974 [list] [network] Prp19 complex  (11 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IBA ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_566557.1 
BLAST NP_566557.1 
Orthologous [Ortholog page] PRL1 (ath)  LOC4332781 (osa)  LOC7475907 (ppo)  LOC25488112 (mtr)  LOC100248018 (vvi)  LOC100282926 (zma)  LOC100775526 (gma)  LOC100782357 (gma)  LOC101250160 (sly)  LOC103860812 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  pero 2,  mito 1  (predict for NP_566557.1)
Subcellular
localization
TargetP
other 4  (predict for NP_566557.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03008 Ribosome biogenesis in eukaryotes 2
ath03060 Protein export 2
Genes directly connected with AT3G16650 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 NUC-L2 nucleolin like 2 [detail] 821392
5.1 AT5G39850 Ribosomal protein S4 [detail] 833981
4.7 AT3G58200 TRAF-like family protein [detail] 824989
4.3 ATHSRP54A signal recognition particle 54 kDa subunit [detail] 838100
Coexpressed
gene list		 [Coexpressed gene list for AT3G16650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258380_at
258380_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258380_at
258380_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258380_at
258380_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820917      
Refseq ID (protein) NP_566557.1 


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