[←][→] ath   AT3G01320 Gene
functional annotation
Function   SIN3-like 1  
GO BP
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001189789.1  NP_186781.4 
BLAST NP_001189789.1  NP_186781.4 
Orthologous [Ortholog page] SNL2 (ath)  LOC11421085 (mtr)  LOC100254234 (vvi)  LOC100807181 (gma)  LOC100812405 (gma)  LOC101261776 (sly)  LOC101264278 (sly)  LOC103850076 (bra)  LOC103850963 (bra)  LOC103856106 (bra) 
Subcellular
localization
wolf
nucl 6,  cysk 2,  chlo 1,  cysk_plas 1  (predict for NP_001189789.1)
nucl 6,  cysk 2,  chlo 1,  cysk_plas 1  (predict for NP_186781.4)
Subcellular
localization
TargetP
mito 7  (predict for NP_001189789.1)
mito 7  (predict for NP_186781.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SNL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT5G47690 binding protein [detail] 834820
10.0 SDG2 SET domain protein 2 [detail] 827183
9.0 EMB2773 PHD finger family protein [detail] 831407
8.2 ALY3 DNA binding protein [detail] 821697
8.2 SNL2 SIN3-like 2 [detail] 831354
7.3 UVH3 5'-3' exonuclease family protein [detail] 822427
7.3 AT4G10930 RING/U-box protein [detail] 826692
5.7 SDG29 SET domain group 29 [detail] 835424
Coexpressed
gene list		 [Coexpressed gene list for SNL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259117_at
259117_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259117_at
259117_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259117_at
259117_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821265      
Refseq ID (protein) NP_001189789.1 
NP_186781.4 


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