[←][→] ath   AT3G18380 Gene
functional annotation
Function   DNA-BINDING TRANSCRIPTION FACTOR 2  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (126 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_001189923.1  NP_188467.2  NP_974333.1 
BLAST NP_001189923.1  NP_188467.2  NP_974333.1 
Orthologous [Ortholog page] LOC4341060 (osa)  LOC4341065 (osa)  LOC11413543 (mtr)  LOC100246907 (vvi)  LOC100273133 (zma)  LOC100279552 (zma)  LOC100783895 (gma)  LOC100785646 (gma)  LOC101264256 (sly)  LOC103838095 (bra)  LOC103869571 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001189923.1)
chlo 6,  nucl 1,  mito 1,  E.R. 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_188467.2)
chlo 6,  nucl 1,  mito 1,  E.R. 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_974333.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001189923.1)
other 8  (predict for NP_188467.2)
other 8  (predict for NP_974333.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with SHH2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT5G63260 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 836446
7.0 TLP3 tubby like protein 3 [detail] 819402
6.9 AT3G58560 DNAse I-like superfamily protein [detail] 825025
6.1 CLPS3 CLP-similar protein 3 [detail] 819626
6.1 AT1G16690 Enhancer of polycomb-like transcription factor protein [detail] 838238
4.9 AT3G12210 DNA binding protein [detail] 820401
Coexpressed
gene list		 [Coexpressed gene list for SHH2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257727_at
257727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257727_at
257727_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257727_at
257727_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821367      
Refseq ID (protein) NP_001189923.1 
NP_188467.2 
NP_974333.1 


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