[←][→] ath   AT3G18990 Gene
functional annotation
Function   AP2/B3-like transcriptional factor family protein  
GO BP
GO:0010048 [list] [network] vernalization response  (12 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
KEGG
Protein NP_001326749.1  NP_188529.2 
BLAST NP_001326749.1  NP_188529.2 
Orthologous [Ortholog page] AT3G18960 (ath)  AT4G01580 (ath)  AT1G49475 (ath)  RTV1 (ath)  LOC7477988 (ppo)  LOC7490337 (ppo)  LOC11405350 (mtr)  LOC11405351 (mtr)  LOC11408476 (mtr)  LOC11408477 (mtr)  LOC11412282 (mtr)  LOC11418291 (mtr)  LOC11419551 (mtr)  LOC11426643 (mtr)  LOC11434552 (mtr)  LOC11435758 (mtr)  LOC11437270 (mtr)  LOC11438033 (mtr)  LOC11438683 (mtr)  LOC11440147 (mtr)  LOC11442747 (mtr)  LOC11443178 (mtr)  LOC11443561 (mtr)  LOC11446380 (mtr)  LOC25482671 (mtr)  LOC25482673 (mtr)  LOC25482710 (mtr)  LOC25483273 (mtr)  LOC25496315 (mtr)  LOC100264028 (vvi)  LOC100267202 (vvi)  LOC100779965 (gma)  LOC100789352 (gma)  LOC100793469 (gma)  LOC100793986 (gma)  LOC100800609 (gma)  LOC100806715 (gma)  LOC100813285 (gma)  LOC100815020 (gma)  LOC100815331 (gma)  LOC100818507 (gma)  LOC100819782 (gma)  LOC101244431 (sly)  LOC101244757 (sly)  LOC101248376 (sly)  LOC101249790 (sly)  LOC101259709 (sly)  LOC101260398 (sly)  LOC101261202 (sly)  LOC101261590 (sly)  LOC101264140 (sly)  LOC101266308 (sly)  LOC102661645 (gma)  LOC102661781 (gma)  LOC102669906 (gma)  LOC103832939 (bra)  LOC103832940 (bra)  LOC103837597 (bra)  LOC103859783 (bra)  LOC103868650 (bra)  LOC103869503 (bra)  LOC103869505 (bra)  LOC104644667 (sly)  LOC104645266 (sly)  LOC104645267 (sly)  LOC104646199 (sly)  LOC104646201 (sly)  LOC104649657 (sly)  LOC104878799 (vvi)  LOC104878813 (vvi)  LOC104880722 (vvi)  LOC104880725 (vvi)  LOC104880726 (vvi)  LOC104880727 (vvi)  LOC104880728 (vvi)  LOC106797693 (gma)  LOC109119543 (sly)  LOC109121519 (vvi)  LOC112416087 (mtr)  LOC112418283 (mtr)  LOC112418296 (mtr)  LOC112418315 (mtr) 
Subcellular
localization
wolf
chlo 3,  mito 2,  nucl 2,  cyto_mito 1,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001326749.1)
nucl 4,  chlo 3,  mito 1,  cyto_mito 1,  cyto 1,  extr 1  (predict for NP_188529.2)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001326749.1)
other 7,  mito 3  (predict for NP_188529.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VRN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 RTV1 related to vernalization1 1 [detail] 841372
4.9 VAM3 Syntaxin/t-SNARE family protein [detail] 834730
4.5 TLP10 tubby like protein 10 [detail] 839112
Coexpressed
gene list		 [Coexpressed gene list for VRN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256944_at
256944_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256944_at
256944_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256944_at
256944_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821432      
Refseq ID (protein) NP_001326749.1 
NP_188529.2 


The preparation time of this page was 0.2 [sec].